Jatropha Genome Database
- JcCB0188171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0188171.10 + phase: 0
(1502 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02137 208 3e-53
>KJC_c02137
Length = 1494
Score = 208 bits (105), Expect = 3e-53
Identities = 258/309 (83%)
Strand = Plus / Minus
Query: 222 tggtgttgctttctgtggaacacttgcaggccagcttttctttggctggctcggtgataa 281
|||||| || ||||||||||| |||||||||||||| || ||||||||||| || |||||
Sbjct: 1197 tggtgtagcattctgtggaactcttgcaggccagctattttttggctggcttggcgataa 1138
Query: 282 aatgggtagaaaacgtgtttatggtatgacactgatgcttatggttgtttgctctattgc 341
|||||| | || || ||||||||||| || ||||||||||| | || || ||||
Sbjct: 1137 aatggggcggaagaaggtctatggtatgactcttatgcttatggtgatatgttcagttgc 1078
Query: 342 ttcaggtctctcttttagtaaaaatcctactgctgttatggctactctgtgtttctttcg 401
|||||| || |||||| || | ||| | | || ||||| | ||||| |||||||||||
Sbjct: 1077 ttcaggcctttcttttggtcataatgcaaaagcaattatgtcaactctttgtttctttcg 1018
Query: 402 gttctggcttggttttggcattggtggtgactacccactttccgctacaatcatgtctga 461
|||||||||||||||||| || || ||||| || |||||||| |||||||||||||||||
Sbjct: 1017 gttctggcttggttttggtatcggaggtgattatccactttctgctacaatcatgtctga 958
Query: 462 gtatgctaataaaaagactcgtggtgctttcattgcttctgtctttgctatgcaaggttt 521
|||||||| || |||||||| || ||||| |||||| |||| |||||||||||||||||
Sbjct: 957 atatgctaacaagaagactcggggcgcttttattgctgctgtatttgctatgcaaggttt 898
Query: 522 tggaatttt 530
|||||||||
Sbjct: 897 tggaatttt 889
Score = 163 bits (82), Expect = 2e-39
Identities = 370/462 (80%), Gaps = 3/462 (0%)
Strand = Plus / Minus
Query: 874 ggacttcacttgctcgggacaactaccacatggttcttgttggacattgcattctacagc 933
||||||||||| || |||||||| || |||||||||||| | ||||||||||| |||||
Sbjct: 536 ggacttcacttacttgggacaacaactacatggttcttgcttgacattgcattttacagt 477
Query: 934 caaaatttgtttcagaaggacatttttagtgctattggttggattcctaaagctaaaacc 993
|||||| | ||||| ||||| || |||||||| ||||| ||||||||| || |||||
Sbjct: 476 caaaatctttttcaaaaggatatctttagtgccattgggtggattcctcctgcaaaaaca 417
Query: 994 atgagtgcacttgaagaggtttgcaagatcagtagagcacaaactcttattgccctttgc 1053
|||| ||| ||||||| |||| | || ||||||||||| || || || || |||
Sbjct: 416 atgaatgctattgaagaagtttatagaattgcaagagcacaaaccctcatcgctctatgc 357
Query: 1054 agtacagttccagggtattggtttactgttatattcattgacagaattggaaggtttgca 1113
||||||||||| || || ||||||||||| ||||||||| ||||||||| || |||
Sbjct: 356 agtacagttcccggctactggtttactgtagctctcattgacaaaattggaagattcgca 297
Query: 1114 atccaattgatgggattcttctttatgacagtattcatgtttgctttgtccataccttac 1173
|| || |||||||||||||| || |||||||| || |||||||| || | || ||||||
Sbjct: 296 attcagttgatgggattctttttcatgacagtttttatgtttgcattagctattccttac 237
Query: 1174 catcactggactttaccagg-caatcgaattggattcattgtcttgtattcattcacctt 1232
|||||||||| | ||| || ||||||||||| | || |||| ||||| || ||
Sbjct: 236 gatcactggac-acataaggaaaaccgaattggatttgtggtaatgtactcattaacatt 178
Query: 1233 cttcttcgccaatttcggtccaaatgccacaaccttcgttgtgcctgcagagattttccc 1292
|||||| || || || || || ||||| || || || ||||| || || |||||||||||
Sbjct: 177 cttctttgctaactttggacctaatgcaactacatttgttgttccggccgagattttccc 118
Query: 1293 agcaagattaaggtctacctgccatggcatatcagctgcatc 1334
|||||||||||||||||| |||||||| |||||||| |||||
Sbjct: 117 agcaagattaaggtctacttgccatgg-atatcagcagcatc 77
Score = 103 bits (52), Expect = 1e-21
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 676 gctgcactaacttattattggcgtatgaagatgcctgaaactgcgcgttacactgcttta 735
||||| || ||||| |||||| | ||||| |||||||||||||| ||||||||||| |
Sbjct: 743 gctgctcttacttactattggagaatgaaaatgcctgaaactgctcgttacactgccctt 684
Query: 736 gttgccaagaatgcaaaacaggctgctgctgatatgtccaaagt 779
|| |||||||||||||||||||||||| |||||||||| |||||
Sbjct: 683 gtagccaagaatgcaaaacaggctgcttctgatatgtcaaaagt 640