Jatropha Genome Database

JcCB0187481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0187481.10 + phase: 0 /partial
         (443 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02332                                                            821   0.0  

>KJC_c02332 
          Length = 1157

 Score =  821 bits (414), Expect = 0.0
 Identities = 414/414 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggcgttcccttctcgtctcttatccagatccaagcagctctatggcagtcaagtcatt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 atggcgttcccttctcgtctcttatccagatccaagcagctctatggcagtcaagtcatt 1034

                                                                        
Query: 61   ctacaacaggatcacgctattcctgtccgttactttgccaaaaaagctgatcctccaagt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 ctacaacaggatcacgctattcctgtccgttactttgccaaaaaagctgatcctccaagt 974

                                                                        
Query: 121  caaaaaggagatagtcctccaaggcttaagggagatgagttgttaaagggcatatttctg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973  caaaaaggagatagtcctccaaggcttaagggagatgagttgttaaagggcatatttctg 914

                                                                        
Query: 181  gaagtcaagaagaaatatgagacagctgttggaatacttaagaaggagaagatcaccatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913  gaagtcaagaagaaatatgagacagctgttggaatacttaagaaggagaagatcaccatt 854

                                                                        
Query: 241  gctcccgaggatccttcagctgtttctcaatatgcgaagatcatgaagacaattagagag 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853  gctcccgaggatccttcagctgtttctcaatatgcgaagatcatgaagacaattagagag 794

                                                                        
Query: 301  aaggctggtttgttctctgagtctgaaagaattaaattcactattgagacacaaaccgtc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793  aaggctggtttgttctctgagtctgaaagaattaaattcactattgagacacaaaccgtc 734

                                                                  
Query: 361  gatattccagatgctcggacatatttgttgacattgaaggaaattcgaatcaag 414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733  gatattccagatgctcggacatatttgttgacattgaaggaaattcgaatcaag 680