Jatropha Genome Database

JcCB0184991.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0184991.10 + phase: 0 /pseudo/partial
         (2087 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07929                                                             82   6e-15

>KJC_c07929 
          Length = 1106

 Score = 81.8 bits (41), Expect = 6e-15
 Identities = 101/121 (83%)
 Strand = Plus / Minus

                                                                       
Query: 789 gagagagaaaaattcttttggttaacggatgaagaatttgctaggcaaactattgctggt 848
           |||||||| | ||| |||||||||| |||||| ||||| | |||||| ||| |||| || 
Sbjct: 264 gagagagacagatttttttggttaagggatgaggaattcggtaggcagactcttgcagga 205

                                                                       
Query: 849 ctcaacccttgcagcatacaattgatcgaagaatggccactgaagagtaaacttgatcct 908
           |||||||| |  |||||| ||||| ||  |||||||||| |||||||| |||||||||||
Sbjct: 204 ctcaacccattgagcataaaattggtcacagaatggccattgaagagtgaacttgatcct 145

            
Query: 909 g 909
           |
Sbjct: 144 g 144