Jatropha Genome Database

JcCB0183721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0183721.10 - phase: 2 /partial
         (931 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09444                                                            797   0.0  

>KJC_c09444 
          Length = 785

 Score =  797 bits (402), Expect = 0.0
 Identities = 416/418 (99%), Gaps = 2/418 (0%)
 Strand = Plus / Minus

                                                                       
Query: 515 cttgcagctgggtcatgggtgggcccatatgccatgtgccgctcatgggaactacttgcc 574
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 cttgcagctgggtcatgggtgggcccatatgccatgtgccgctcatgggaactacttgcc 726

                                                                       
Query: 575 cgctgtaagagagaggaaaacaaccttgaacatgaggcacttccaatggctgtttatgtt 634
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cgctgtaagagagaggaaaacaaccttgaacatgaggcacttccaatggctgtttatgtt 666

                                                                       
Query: 635 gtttctggtgatgaagatggagagcgtggtggagccccagttgtctgcattgaagatgcc 694
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gtttctg-tgatgaagatggagagcgtggtggagccccagttgtctgcattgaagatgcc 607

                                                                       
Query: 695 tcaagacactgtttagatttttctagaggtcaagcaaattggacaccaattcttctgttg 754
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tcaagacactgtttagatttttctagaggtcaagcaaattggacaccaattcttctgttg 547

                                                                       
Query: 755 gttcccttggttcttggacttgaaaaagtaaatctaaggtatattccatctctacaggca 814
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gttcccttggttcttggacttgaaaaagtaaatctaaggtatattccatctctacaggca 487

                                                                       
Query: 815 acgttaa-cctttcctcaaagtcttggaattatgggtgggaaacctggtgcctcaacata 873
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acgttaaccctttcctcaaagtcttggaattatgggtgggaaacctggtgcctcaacata 427

                                                                     
Query: 874 cattgttggtgtacaagatgacaatgccttttatcttgatcctcatggagtccaaccg 931
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cattgttggtgtacaagatgacaatgccttttatcttgatcctcatggagtccaaccg 369