Jatropha Genome Database
- JcCB0181751.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0181751.10 + phase: 0 /partial
(653 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00328 1261 0.0
KJC_c03413 599 e-171
KJC_c03780 125 1e-28
>KJC_c00328
Length = 2495
Score = 1261 bits (636), Expect = 0.0
Identities = 636/636 (100%)
Strand = Plus / Plus
Query: 18 gagtaacacgagcatctcaggctcgtgtagccctttctcagggaaacagaaaggactagt 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gagtaacacgagcatctcaggctcgtgtagccctttctcagggaaacagaaaggactagt 217
Query: 78 acctacagctccttcaacattaaaagtagtggctttgaatcctaatagggatcggaacgg 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 acctacagctccttcaacattaaaagtagtggctttgaatcctaatagggatcggaacgg 277
Query: 138 cagcgttgtaatggagagctcactgcaggaaatcagagatggagcttccgtacttgactt 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cagcgttgtaatggagagctcactgcaggaaatcagagatggagcttccgtacttgactt 337
Query: 198 cgactctgacaaagccaccgttactggtggcgttcgtgatgtgtatggagaggatacagc 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cgactctgacaaagccaccgttactggtggcgttcgtgatgtgtatggagaggatacagc 397
Query: 258 caccgaggaccagcttgtcacgccatggtccctttctgttgctagtgggtactctttgtt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caccgaggaccagcttgtcacgccatggtccctttctgttgctagtgggtactctttgtt 457
Query: 318 gagagatccacatcacaacaaggggcttgccttcaatgataaagagagaaatgcccacta 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gagagatccacatcacaacaaggggcttgccttcaatgataaagagagaaatgcccacta 517
Query: 378 cctgcgaggccttcttccaccagcagtcgtttctcaggagctccaggtaaagaaaatgat 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cctgcgaggccttcttccaccagcagtcgtttctcaggagctccaggtaaagaaaatgat 577
Query: 438 gcacattattcgccagtatcaatttccactgcaaaagtacatggctatgatggaccttca 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gcacattattcgccagtatcaatttccactgcaaaagtacatggctatgatggaccttca 637
Query: 498 ggagagaaatgaaaaacttttctacaagcttctcattgagcatgttgaagagatgctccc 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ggagagaaatgaaaaacttttctacaagcttctcattgagcatgttgaagagatgctccc 697
Query: 558 tattgtttacactccaactgttggtgaggcatgccagaaatatggaagtatctttggacg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tattgtttacactccaactgttggtgaggcatgccagaaatatggaagtatctttggacg 757
Query: 618 tcctcagggtctttacatcagtttgaatgaaaagta 653
||||||||||||||||||||||||||||||||||||
Sbjct: 758 tcctcagggtctttacatcagtttgaatgaaaagta 793
>KJC_c03413
Length = 536
Score = 599 bits (302), Expect = e-171
Identities = 319/322 (99%), Gaps = 2/322 (0%)
Strand = Plus / Minus
Query: 331 cacaacaaggggcttgccttcaatgataaagag-agaaatgcccactacctgcgaggcct 389
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 536 cacaacaaggggcttgccttcaatgataaagagtagaaatgcccactacctgcgaggcct 477
Query: 390 tcttccaccagcagtcgtttctcaggagctccaggtaaagaaaatgatgcacattattcg 449
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 476 tcttccaccagcagtcgtttctcaggagctccaggtaaagaaaatgatgcacattactcg 417
Query: 450 ccagtatcaatttccactgcaaaagtacatggctatgatggaccttcaggagagaaatga 509
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ccagtatcaatttc-actgcaaaagtacatggctatgatggaccttcaggagagaaatga 358
Query: 510 aaaacttttctacaagcttctcattgagcatgttgaagagatgctccctattgtttacac 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aaaacttttctacaagcttctcattgagcatgttgaagagatgctccctattgtttacac 298
Query: 570 tccaactgttggtgaggcatgccagaaatatggaagtatctttggacgtcctcagggtct 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tccaactgttggtgaggcatgccagaaatatggaagtatctttggacgtcctcagggtct 238
Query: 630 ttacatcagtttgaatgaaaag 651
||||||||||||||||||||||
Sbjct: 237 ttacatcagtttgaatgaaaag 216
>KJC_c03780
Length = 850
Score = 125 bits (63), Expect = 1e-28
Identities = 141/167 (84%)
Strand = Plus / Minus
Query: 478 atggctatgatggaccttcaggagagaaatgaaaaacttttctacaagcttctcattgag 537
||||| |||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 248 atggccatgatggaacttgaggagagaaatgaaagactgttctacaagcttctcattgat 189
Query: 538 catgttgaagagatgctccctattgtttacactccaactgttggtgaggcatgccagaaa 597
||||||||||| |||| || || || ||||||||||| || || || || ||||||||
Sbjct: 188 aatgttgaagagttgcttcccatcgtatacactccaacagtaggcgaagcttgccagaag 129
Query: 598 tatggaagtatctttggacgtcctcagggtctttacatcagtttgaa 644
|||||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 128 tatggaagtatcttcaagcgccctcaggggctatacattagtttgaa 82