Jatropha Genome Database

JcCB0176751.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0176751.20 - phase: 2 /partial
         (739 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04568                                                             62   2e-09

>KJC_c04568 
          Length = 884

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                       
Query: 96  ataacatcaaagcagtcatcctggatttgtttattgctggaagtgagacttcatctacaa 155
           |||| ||||| ||||||||||||||| | ||  |||| || |||||||| ||||| ||||
Sbjct: 149 ataatatcaaggcagtcatcctggatattttcgttgcgggtagtgagacatcatcaacaa 90

                              
Query: 156 ctgtagaatgggcaatgtc 174
           | ||||||||||| |||||
Sbjct: 89  cagtagaatgggcgatgtc 71