Jatropha Genome Database
- JcCB0176661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0176661.10 + phase: 0 /partial
(612 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06880 1082 0.0
>KJC_c06880
Length = 979
Score = 1082 bits (546), Expect = 0.0
Identities = 601/613 (98%), Gaps = 11/613 (1%)
Strand = Plus / Plus
Query: 1 gtcctgcatccacaatccatgagacctgctagggaaggtgatattcctgttagggttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtcctgcatccacaatccatgagacctgctagggaaggtgatattcctgttagggttaag 415
Query: 61 aattcttacaacccaaatgctccaggaactctcataacgagagcaagagatatgagaaag 120
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 416 aattcttacaacccaaatgctccagga-ctctcataac-agagcaagagatatgagaaag 473
Query: 121 gcagtactaactagcattgttctgaaacggaatgtgactatgttggatattgttagcact 180
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 474 gcagtactaactagcattgttctgaaacggta-gtgactatgttggatattgttagcact 532
Query: 181 cgtatgcttggtcaatttggctttcttgccaaggtattctcaatctttgaagatctgggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cgtatgcttggtcaatttggctttcttgccaaggtattctcaatctttgaagatctgggc 592
Query: 241 atatcggttgatgttgtagcaactagtgaagttagtatttccttgacactggatccatca 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 593 atatcggttgatgttgtagcaactagtgaagttagta-ttccttgacactggatccatca 651
Query: 301 aaagtttggagcagggaactcattcagcaggcaagcgaactcgaccatgttgtggaagag 360
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 652 aaagtttggagcagggaactcattcagcag------gaactcgaccatgttgtggaagag 705
Query: 361 ctagagaagattgctgtagtcaatctccttcagcatagatcaattatttctcttattggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ctagagaagattgctgtagtcaatctccttcagcatagatcaattatttctcttattggg 765
Query: 421 aatgttcagaggtcatcattgatattggagaaggtattcaatgttcttcgaaccaatggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aatgttcagaggtcatcattgatattggagaaggtattcaatgttcttcgaaccaatggt 825
Query: 481 gtcaatgttcagatgatatcgcaaggtgcatctaaggttaatatctcattaattgtgaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gtcaatgttcagatgatatcgcaaggtgcatctaaggttaatatctcattaattgtgaat 885
Query: 541 gacgacgaagcagagcagtgtgtcagatcactccac-aaaacattctttgaaacagacat 599
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 886 gacgacgaagcagagcagtgtgtcagatcactccacaaaaacattctttgaaacagacat 945
Query: 600 ttctgaattggat 612
|||||||||||||
Sbjct: 946 ttctgaattggat 958