Jatropha Genome Database
- JcCB0175951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0175951.10 + phase: 1 /partial
(1544 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06000 763 0.0
KJC_c10494 603 e-172
KJC_c06403 260 9e-69
KJC_c03455 228 3e-59
KJC_c02058 64 1e-09
>KJC_c06000
Length = 517
Score = 763 bits (385), Expect = 0.0
Identities = 385/385 (100%)
Strand = Plus / Minus
Query: 1160 tgccagcaatattgtaactgcagtgtatatagccacaggacaggatcccgcccaaaatgt 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tgccagcaatattgtaactgcagtgtatatagccacaggacaggatcccgcccaaaatgt 458
Query: 1220 ggagagttctcactgtattaccatgatggaagctgttaatgatggcaaagaccttcacat 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggagagttctcactgtattaccatgatggaagctgttaatgatggcaaagaccttcacat 398
Query: 1280 ctcagtcaccatgccttccattgaggtgggtacagtaggaggtggcactcaactggcatc 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctcagtcaccatgccttccattgaggtgggtacagtaggaggtggcactcaactggcatc 338
Query: 1340 gcaatcagcttgcctgaacctacttggggtgaaaggtgcaagcaaagagttaccagggtc 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gcaatcagcttgcctgaacctacttggggtgaaaggtgcaagcaaagagttaccagggtc 278
Query: 1400 aaattcaaggcttctggctagtattgtggctggttctgttcttgcaggggaactgtctct 1459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaattcaaggcttctggctagtattgtggctggttctgttcttgcaggggaactgtctct 218
Query: 1460 catgtctgctcttgcagctggacaactggttaagagccacatgagatacaacagatctag 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 catgtctgctcttgcagctggacaactggttaagagccacatgagatacaacagatctag 158
Query: 1520 caaagatgtgcccaaaatagcttct 1544
|||||||||||||||||||||||||
Sbjct: 157 caaagatgtgcccaaaatagcttct 133
>KJC_c10494
Length = 634
Score = 603 bits (304), Expect = e-172
Identities = 313/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 1 cttatttcctcctccatagatggcgggaaaagatccgtaactctactcctcttcacattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cttatttcctcctccatagatggcgggaaaagatccgtaactctactcctcttcacattg 256
Query: 61 ttaatttccctgagatagccgctttggtttgtttagtcgcttctgtaatctatcttctcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttaatttccctgagatagccgctttggtttgtttagtcgcttctgtaatctatcttctcg 196
Query: 121 gtttctttggcattggctttgttcattctttcacttctaaagtttccactgatgcctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gtttctttggcattggctttgttcattctttcacttctaaagtttccactgatgcctggg 136
Query: 181 aaattgaggaatatgacgtcgtcaa-aaaagatactcgctctccgggaccttgcgccgcc 239
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 135 aaattgaggaatatgacgtcgtcaaaaaaagntactcgctctccgggaccttgcgccgcc 76
Query: 240 tctcttgactgctctgtccatcctacgaccaaaattgctccaattcctttatctgatgat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tctcttgactgctctgtccatcctacgaccaaaattgctccaattcctttatctgatgat 16
Query: 300 gacgaacagattatc 314
|||||||||||||||
Sbjct: 15 gacgaacagattatc 1
>KJC_c06403
Length = 906
Score = 260 bits (131), Expect = 9e-69
Identities = 523/647 (80%), Gaps = 5/647 (0%)
Strand = Plus / Minus
Query: 858 ggtgatgctatgggaatgaacatggtgtctaaaggagtccagaacgtcctcgattacctt 917
|||||||||||||| ||||| ||||| |||||||| ||||| || || | |||| |||
Sbjct: 657 ggtgatgctatgggtatgaatatggtctctaaaggtgtcca-aatgtattggatttcctc 599
Query: 918 cgagacgatttccctgacatggatgtcattggcatctctggtaatttttgttcggataag 977
| |||||||||||||||||||| |||||||||| |||||||| || ||||||||||||
Sbjct: 598 cagaacgatttccctgacatggatatcattggcatttctggtaacttctgttcggataag 539
Query: 978 aagccagcagcagttaactggatagaggggcgtggaaagtctgtagtatgtgaggcaatc 1037
| ||||||||| || |||||||| || || | || ||||| ||||| |||||||| ||
Sbjct: 538 a-gccagcagctgtgaactggattgaaggaaggggcaagtcagtagtgtgtgaggccatt 480
Query: 1038 ataaaggaagaagtggt-aagaaaggtgttgaaaaccaacgtggctgctttggtggagct 1096
||||||| || ||||| ||||||| ||||||| || || |||| || |||||||||||
Sbjct: 479 ataaagggtgatgtggtgaagaaag-tgttgaagacgaatgtggaggcattggtggagct 421
Query: 1097 taacatgcttaaaaaccttaccggctcagccgtggctggtgctcttggcgggtttaatgc 1156
||||||||| || ||||| || || || || ||||||| ||| | || || || || ||
Sbjct: 420 taacatgctgaagaacctcactggttctgcaatggctggagctttaggtggtttcaacgc 361
Query: 1157 ccatgccagcaatattgtaactgcagtgtatatagccacaggacaggatcccgcccaaaa 1216
||||| || || ||||| || || | || |||||||| || || ||||| || || ||
Sbjct: 360 tcatgctagtaacattgtgaccgctatctacatagccactggtcaagatcctgcacagaa 301
Query: 1217 tgtggagagttctcactgtattaccatgatggaagctgttaatgatggcaaagaccttca 1276
||| |||||||| || |||||||||||||||||||||||||| ||||| | || |||||
Sbjct: 300 tgtagagagttcacattgtattaccatgatggaagctgttaacgatggacaggatcttca 241
Query: 1277 catctcagtcaccatgccttccattgaggtgggtacagtaggaggtggcactcaactggc 1336
|||| ||||| |||||||| |||||||| || || || |||||||| || || || |
Sbjct: 240 tgtctctgtcactatgccttctattgaggttggcacggtgggaggtggaacgcagcttac 181
Query: 1337 atcgcaatcagcttgcctgaacctacttggggtgaaaggtgcaagcaaagagttaccagg 1396
||| || ||||| ||| ||||||||||||||||||| ||||| ||||||||| | |||||
Sbjct: 180 atctcagtcagcgtgcttgaacctacttggggtgaagggtgcgagcaaagagatgccagg 121
Query: 1397 gtcaaattcaaggcttctggctagtattgtggctggttctgttcttgcaggggaactgtc 1456
| |||||||||||| | || || || ||||| |||||||| || || || ||||
Sbjct: 120 agctaattcaaggctt-tagcctccatagttgctggctctgttctggccggagagttgtc 62
Query: 1457 tctcatgtctgctcttgcagctggacaactggttaagagccacatga 1503
||| |||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 61 tctgatgtctgctcttgctgctggtcaacttgttaagagccacatga 15
>KJC_c03455
Length = 647
Score = 228 bits (115), Expect = 3e-59
Identities = 406/503 (80%)
Strand = Plus / Plus
Query: 1026 tgtgaggcaatcataaaggaagaagtggtaagaaaggtgttgaaaaccaacgtggctgct 1085
||||||||||| || |||||||| ||||| | ||| || || |||||||| || ||| |
Sbjct: 28 tgtgaggcaattatcaaggaagaggtggtgaaaaatgtattaaaaaccaatgttgcttcc 87
Query: 1086 ttggtggagcttaacatgcttaaaaaccttaccggctcagccgtggctggtgctcttggc 1145
| |||||||| |||||||| ||||| ||| | || || || | ||||||||||| ||
Sbjct: 88 ctagtggagctcaacatgctaaaaaatcttgctggttctgctattgctggtgctctgggt 147
Query: 1146 gggtttaatgcccatgccagcaatattgtaactgcagtgtatatagccacaggacaggat 1205
||||||||||| ||||| | || ||||| ||||| | | ||| || || || ||||||
Sbjct: 148 gggtttaatgctcatgcaggaaacattgtctctgcaatctttattgcaactggccaggat 207
Query: 1206 cccgcccaaaatgtggagagttctcactgtattaccatgatggaagctgttaatgatggc 1265
|| || || ||| | |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 208 ccagcacagaatattgagagttctcactgcattacgatgatggaagctgttaatgatgga 267
Query: 1266 aaagaccttcacatctcagtcaccatgccttccattgaggtgggtacagtaggaggtggc 1325
|| || || || ||||||| | |||||||||||||||||||||||||| ||||| ||
Sbjct: 268 aaggatctccatgtctcagtgtcaatgccttccattgaggtgggtacagttggaggagga 327
Query: 1326 actcaactggcatcgcaatcagcttgcctgaacctacttggggtgaaaggtgcaagcaaa 1385
|||||||| ||||| || || ||||| || || | ||||||||||| || |||||||||
Sbjct: 328 actcaacttgcatctcagtctgcttgtctaaatttgcttggggtgaagggggcaagcaaa 387
Query: 1386 gagttaccagggtcaaattcaaggcttctggctagtattgtggctggttctgttcttgca 1445
|||| |||||| ||||| |||||||| || || | || || |||||||| ||| | ||
Sbjct: 388 gagtcaccaggatcaaactcaaggctccttgccaccatagtagctggttcagttttggcc 447
Query: 1446 ggggaactgtctctcatgtctgctcttgcagctggacaactggttaagagccacatgaga 1505
|| || |||||||| |||||||| |||||||||| || || || || |||||||||| |
Sbjct: 448 ggtgagctgtctctgatgtctgccattgcagctgggcagcttgtcaacagccacatgaaa 507
Query: 1506 tacaacagatctagcaaagatgt 1528
||||| ||||| |||||||||||
Sbjct: 508 tacaatagatccagcaaagatgt 530
>KJC_c02058
Length = 895
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 447 gatggtttcgattatgagtccatactagggcagtgttgtgagatgccaattggatatgtg 506
||||| |||||||| ||||| || ||||||||||| ||||| |||||| | ||||| |||
Sbjct: 300 gatgggttcgattacgagtcgattctagggcagtgctgtgaaatgccagtcggatacgtg 359
Query: 507 cagattcc 514
||||||||
Sbjct: 360 cagattcc 367