Jatropha Genome Database
- JcCB0175681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0175681.10 + phase: 1 /partial
(596 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04477 860 0.0
KJC_c04586 359 5e-99
>KJC_c04477
Length = 631
Score = 860 bits (434), Expect = 0.0
Identities = 441/442 (99%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 155 ggctgtcgtcaaagaaactctccgtctcaggatggccattcctcttcttgttcctcacat 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggctgtcgtcaaagaaactctccgtctcaggatggccattcctcttcttgttcctcacat 572
Query: 215 gaatctccacgaagctaagcttgccggatatgacattcctgctgaaagcaaaattttagt 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 571 gaatctccacgaagctaagcttgccggatatgacattcctgctgaaagcaaaatttt-gt 513
Query: 275 taatgcttggtggcttgctaacaatcctgctaattggaaaaatcctgaagagttcaggcc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 taatgcttggtggcttgctaacaatcctgctaattggaaaaatcctgaagagttcaggcc 453
Query: 335 agaaaggttcttggaagaggagtcaaaggttgaggctaatggaaacgatttcagatacct 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agaaaggttcttggaagaggagtcaaaggttgaggctaatggaaacgatttcagatacct 393
Query: 395 tcctttcggggtcggaagaaggagctgccctggaattattcttgcattgccaattcttgg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcctttcggggtcggaagaaggagctgccctggaattattcttgcattgccaattcttgg 333
Query: 455 aattaccttggggcgtttggtacagaactttgagctattgccacctcctggacagtcaaa 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aattaccttggggcgtttggtacagaactttgagctattgccacctcctggacagtcaaa 273
Query: 515 gctcgatactacagagaaaggtggccaattcagtttgcatatattgaaccattccaccat 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gctcgatactacagagaaaggtggccaattcagtttgcatatattgaaccattccaccat 213
Query: 575 agttgcaaagccaaggtcattc 596
||||||||||||||||||||||
Sbjct: 212 agttgcaaagccaaggtcattc 191
>KJC_c04586
Length = 1082
Score = 359 bits (181), Expect = 5e-99
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 caattgaaacaacactgtggtcaattgagtggggaattgccgagcttgtaaaccatcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 caattgaaacaacactgtggtcaattgagtggggaattgccgagcttgtaaaccatcctg 961
Query: 61 aaatccaaaagaagctgaggaatgaattagacacagtacttggacctggtcaccaaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 aaatccaaaagaagctgaggaatgaattagacacagtacttggacctggtcaccaaatca 1021
Query: 121 ccgaacctgacacacacaaactcccctatcttcaggctgtcgtcaaagaaactctccgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 ccgaacctgacacacacaaactcccctatcttcaggctgtcgtcaaagaaactctccgtc 1081
Query: 181 t 181
|
Sbjct: 1082 t 1082