Jatropha Genome Database
- JcCB0171551.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0171551.10 + phase: 0 /pseudo/partial
(1188 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01596 2070 0.0
KJC_c09747 198 2e-50
KJC_c05100 123 1e-27
KJC_s20983 103 1e-21
>KJC_c01596
Length = 1569
Score = 2070 bits (1044), Expect = 0.0
Identities = 1058/1060 (99%), Gaps = 2/1060 (0%)
Strand = Plus / Plus
Query: 1 caaagcgataccatcatctctgcttctcccacttccggttttcaaggcaattctgttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 caaagcgataccatcatctctgcttctcccacttccggttttcaaggcaattctgttttc 206
Query: 61 tctcacgttgatcgcgcccctgaggatccaattctcggtgtaaccgtggcgtataacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tctcacgttgatcgcgcccctgaggatccaattctcggtgtaaccgtggcgtataacaaa 266
Query: 121 gaccccagccctgttaagctgaacttgggagttggcgcttatcgaactgaggaagggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaccccagccctgttaagctgaacttgggagttggcgcttatcgaactgaggaagggaaa 326
Query: 181 cctctggttctgaatgtagtgagaaaagctgagcagcagcttgttaatgacaggtcacgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cctctggttctgaatgtagtgagaaaagctgagcagcagcttgttaatgacaggtcacgc 386
Query: 241 gtgaaggaatatcttcccattactgggctcgctgacttcaataaattgagtgctaagctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgaaggaatatcttcccattactgggctcgctgacttcaataaattgagtgctaagctt 446
Query: 301 atttttggtgctgacagcaatgctattcaagagaacagggttaccacagttcagtgcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atttttggtgctgacagcaatgctattcaagagaacagggttaccacagttcagtgcttg 506
Query: 361 tctggtactggttctttgagggttggagctgaatttttagccagacattatcaccaacgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tctggtactggttctttgagggttggagctgaatttttagccagacattatcaccaacgc 566
Query: 421 atcatatacattccccagccaacttggggaaaccaccctaaagtttttactttggctggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atcatatacattccccagccaacttggggaaaccaccctaaagtttttactttggctggg 626
Query: 481 ttatcagtaaaaacttaccggtattatgatcccacaacacgtggactgaacttccaaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttatcagtaaaaacttaccggtattatgatcccacaacacgtggactgaacttccaaggc 686
Query: 541 ttgttggaagatcttgggtctgctccatcaggagctattgtacttcttcatgcatgtgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttgttggaagatcttgggtctgctccatcaggagctattgtacttcttcatgcatgtgcc 746
Query: 601 cataaccccacaggtgttgatccaactttgcagcagtgggatcaaataaggcagctgatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 cataaccccacaggtgttgatccaactttgcagcagtgggatcaaataaggcagctgatg 806
Query: 661 agatcaaaagggttgatgcctttctttgacagtgcctatcagggttttgcaagtggaagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 agatcaaaagggttgatgcctttctttgacagtgcctatcagggttttgcaagtggaagc 866
Query: 721 ctggactctgatgcacaatctgttcgcatgtttgttgctgatggtggtgaacttcttgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 ctggactctgatgcacaatctgttcgcatgtttgttgctgatggtggtgaacttcttgta 926
Query: 781 gctcaaagttatgcaaaaaacatggggctctacggggaacgtgttg-gtgccttgagcat 839
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 927 gctcaaagttatgcaaaaaacatggggctctacggggaacgtgttgtgtgccttgagcat 986
Query: 840 tgtttgcaggactgctgatgttgcgagcagggttgagagccagttgaaacttgtgattag 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 tgtttgcaggactgctgatgttgcgagcagggttgagagccagttgaaacttgtgattag 1046
Query: 900 acccatgtattcaaacccacccattcatggagcatctatagtggctttcatcctaaaaga 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 acccatgtattcaaacccacccattcatggagcatctatagtggctttcatcctaaaaga 1106
Query: 960 taggaatttgtacaatgagtggaccattgagctgaaggcaatggctgaccgtattatctg 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 taggaatttgtacaatgagtggaccattgagctgaaggcaatggctgaccgtattatctg 1166
Query: 1020 catgcgccagcagcta-tttgatgccttgcacgctagagg 1058
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 1167 catgcgccagcagctactttgatgccttgcacgctagagg 1206
>KJC_c09747
Length = 116
Score = 198 bits (100), Expect = 2e-50
Identities = 100/100 (100%)
Strand = Plus / Minus
Query: 827 gtgccttgagcattgtttgcaggactgctgatgttgcgagcagggttgagagccagttga 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gtgccttgagcattgtttgcaggactgctgatgttgcgagcagggttgagagccagttga 44
Query: 887 aacttgtgattagacccatgtattcaaacccacccattca 926
||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aacttgtgattagacccatgtattcaaacccacccattca 4
>KJC_c05100
Length = 566
Score = 123 bits (62), Expect = 1e-27
Identities = 331/418 (79%), Gaps = 2/418 (0%)
Strand = Plus / Plus
Query: 280 aataaattgagtgctaagcttatttttggtgctgacagcaatgctattcaagagaacagg 339
|||||| ||||||| |||||||| || || ||||| ||| ||||| |||||||||||
Sbjct: 145 aataaactgagtgccaagcttatcttaggagctgatagccccgctatacaagagaacaga 204
Query: 340 gttaccacagttcagtgcttgtctggtactggttctttgagggttggagctgaattttta 399
| || || || || ||||||||||||| ||||||||||| ||||||| || ||| |
Sbjct: 205 ataactactgtgcaaggcttgtctggtaccggttctttgagagttggaggggagtttctt 264
Query: 400 gccagacattatcac-caacgcatcatatacattccccagccaacttggggaaaccaccc 458
|| || ||||| || |||| | ||||||||||| |||||||| |||||||| || |
Sbjct: 265 gcaaggcattaccagtcaactgacaatatacattccacagccaacatggggaaatcatac 324
Query: 459 taaagtttttactttggctgggttatcagtaaaaacttaccggtattatgatcccacaac 518
||||| || ||| | || ||||| || ||||| || |||||||| |||||||| ||||
Sbjct: 325 caaagtcttcactcttgcagggttgtctgtaaagacgtaccggtactatgatccagcaac 384
Query: 519 acgtggactgaacttccaaggcttgttggaagatcttgggtctgctccatcaggagctat 578
|||||| ||| | |||||||||||| | || ||||| || ||||| ||| ||||| || |
Sbjct: 385 acgtgggctggatttccaaggcttgctagaggatctgggatctgcaccaacaggatctgt 444
Query: 579 tgtacttcttcatgcatgtgcccataaccccacaggtg-ttgatccaactttgcagcagt 637
|| ||||| ||||||||||| |||||||| || || | |||| ||||| | ||||||
Sbjct: 445 agtgcttctccatgcatgtgcacataacccaactggcgtttgacccaacccttgagcagt 504
Query: 638 gggatcaaataaggcagctgatgagatcaaaagggttgatgcctttctttgacagtgc 695
|||| || || || |||||||| |||||||||| || ||||||| |||||||||||
Sbjct: 505 gggagcagatcagacagctgatcagatcaaaagcatttttgcctttttttgacagtgc 562
>KJC_s20983
Length = 147
Score = 103 bits (52), Expect = 1e-21
Identities = 118/140 (84%)
Strand = Plus / Minus
Query: 632 agcagtgggatcaaataaggcagctgatgagatcaaaagggttgatgcctttctttgaca 691
|||||||||| || || || |||||||| |||||||||| || |||||||||||||||
Sbjct: 146 agcagtgggagcagatcagacagctgatcagatcaaaagcatttttgcctttctttgaca 87
Query: 692 gtgcctatcagggttttgcaagtggaagcctggactctgatgcacaatctgttcgcatgt 751
|||| |||||||||||||| ||||| ||||| || | |||||||| ||||||| |||
Sbjct: 86 gtgcttatcagggttttgcgagtggcagcctagatgcagatgcacagcctgttcggttgt 27
Query: 752 ttgttgctgatggtggtgaa 771
|||||| ||||||||||||
Sbjct: 26 ttgttggagatggtggtgaa 7