Jatropha Genome Database

JcCB0171531.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0171531.10 - phase: 0 /partial
         (393 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01532                                                            428   e-120

>KJC_c01532 
          Length = 1428

 Score =  428 bits (216), Expect = e-120
 Identities = 216/216 (100%)
 Strand = Plus / Minus

                                                                        
Query: 129  cacagaggcatctttgcaaaaggatgactcaacgactgattcgagggatggtagaggtta 188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1428 cacagaggcatctttgcaaaaggatgactcaacgactgattcgagggatggtagaggtta 1369

                                                                        
Query: 189  taaggggcatgatatgttggcacctttcactgctgggtggcagagtactgatttgcatcc 248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 taaggggcatgatatgttggcacctttcactgctgggtggcagagtactgatttgcatcc 1309

                                                                        
Query: 249  tctcgtcatagataagtctgagggtagctatgtttatgacattaatgggaagaagtatct 308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 tctcgtcatagataagtctgagggtagctatgtttatgacattaatgggaagaagtatct 1249

                                                
Query: 309  tgattctcttgctggtctttggtgcactgctttggg 344
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1248 tgattctcttgctggtctttggtgcactgctttggg 1213