Jatropha Genome Database

JcCB0170011.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0170011.20 - phase: 1 /partial
         (155 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01918                                                            244   5e-65

>KJC_c01918 
          Length = 1995

 Score =  244 bits (123), Expect = 5e-65
 Identities = 123/123 (100%)
 Strand = Plus / Minus

                                                                        
Query: 33   agtcctgaagcatgtgcagcaattttatggaagagtgccaaagcttctccaaaggcggct 92
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 agtcctgaagcatgtgcagcaattttatggaagagtgccaaagcttctccaaaggcggct 1058

                                                                        
Query: 93   gaaaaattgaagatcactgctactgagttgtgcaagttgcaaattgcagatggtgtcatt 152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 gaaaaattgaagatcactgctactgagttgtgcaagttgcaaattgcagatggtgtcatt 998

               
Query: 153  cct 155
            |||
Sbjct: 997  cct 995