Jatropha Genome Database
- JcCB0161621.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0161621.10 - phase: 0 /partial
(546 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00209 650 0.0
KJC_s15279 216 4e-56
KJC_c11097 167 3e-41
KJC_c12907 60 6e-09
KJC_c04074 58 2e-08
>KJC_c00209
Length = 1134
Score = 650 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Plus
Query: 118 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 321
Query: 178 gtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacctttg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacctttg 381
Query: 238 agctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttat 441
Query: 298 gaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaatt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaatt 501
Query: 358 atccttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccct 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atccttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccct 561
Query: 418 ggtgcagtgcccatcaccacagctcagg 445
||||||||||||||||||||||||||||
Sbjct: 562 ggtgcagtgcccatcaccacagctcagg 589
>KJC_s15279
Length = 453
Score = 216 bits (109), Expect = 4e-56
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 118 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 233
Query: 178 gtcaatctagggttgtgggatactgctggccaggaagattataatagat 226
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gtcaatctagggttgtgggatactgctggccaggaagattataatagat 282
>KJC_c11097
Length = 519
Score = 167 bits (84), Expect = 3e-41
Identities = 173/200 (86%), Gaps = 2/200 (1%)
Strand = Plus / Plus
Query: 124 gtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcacagtcaat 183
||||| ||||| |||||||| |||||||| ||||| ||||| |||| ||||| || ||
Sbjct: 315 gtgccaactgtttttgacaatttcagtgcaaatgtagttgtcaatggaagcactgttaac 374
Query: 184 ctagggttgtgggatactgctggccaggaagattataatagattaagacctttgagctat 243
|| || ||||||||||||||||| || || ||||||||||| |||||||||||||| |||
Sbjct: 375 ctgggattgtgggatactgctgggcaagaggattataataggttaagacctttgagttat 434
Query: 244 cgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttatgaaaat 303
||||| |||||||||||| | || || |||||||||||||||||||||||||| | ||||
Sbjct: 435 cgtggagctgatgttttcatactggccttctctctcattagcaaggccagttacg-aaat 493
Query: 304 gttgcaaagaagtggattcc 323
||| | ||||||||||||||
Sbjct: 494 gtttc-aagaagtggattcc 512
>KJC_c12907
Length = 662
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 313 aagtggattcctgaattgaggcattatgcacctggagt 350
||||||||||||||| ||| ||||||||||||||||||
Sbjct: 43 aagtggattcctgaactgaagcattatgcacctggagt 6
>KJC_c04074
Length = 506
Score = 58.0 bits (29), Expect = 2e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 121 tatgtgcctactgtgtttgacaacttcagtg-cgaatgtggttgtggatgggagcac 176
||||| || ||||| |||||||| ||||||| | |||||||||||||||||||||||
Sbjct: 446 tatgtaccaactgtttttgacaatttcagtgacaaatgtggttgtggatgggagcac 502