Jatropha Genome Database

JcCB0161221.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0161221.10 - phase: 0 
         (399 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08254                                                            670   0.0  

>KJC_c08254 
          Length = 403

 Score =  670 bits (338), Expect = 0.0
 Identities = 345/346 (99%), Gaps = 1/346 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagtcaaacggaactgacgctgctcaaatcctcggcgaaattgaaacattaaaggca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  atgaagtcaaacggaactgacgctgctcaaatcctcggcgaaattgaaacattaaaggca 117

                                                                       
Query: 61  acaaagagcgacatagagaatagaattgcggctctcgaagctaagctccgtcacttgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 acaaagagcgacatagagaatagaattgcggctctcgaagctaagctccgtcacttgaat 177

                                                                       
Query: 121 ctccccaacgacaacgtctcttctaacggttcttctcttccagtttccattgtcgattat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ctccccaacgacaacgtctcttctaacggttcttctcttccagtttccattgtcgattat 237

                                                                       
Query: 181 ggtttcggccacggattatcgtctgatatgatttaccgttacagtcgtcatctcttactc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ggtttcggccacggattatcgtctgatatgatttaccgttacagtcgtcatctcttactc 297

                                                                       
Query: 241 ccttcctttggagttcaaggccagtcaaatctgttaaagtcttctattttagttgtcgg- 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 298 ccttcctttggagttcaaggccagtcaaatctgttaaagtcttctattttagttgtcggt 357

                                                         
Query: 300 agctggagggttggggtcgcctgctctgttatatcttgcagcttgc 345
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agctggagggttggggtcgcctgctctgttatatcttgcagcttgc 403