Jatropha Genome Database

JcCB0159671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0159671.10 + phase: 0 /pseudo/partial
         (678 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02161                                                            490   e-138

>KJC_c02161 
          Length = 1334

 Score =  490 bits (247), Expect = e-138
 Identities = 247/247 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctaccaacaagaaagttgtaaaagctgatgcttatgtagcagcatgtgatgtccctgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gctaccaacaagaaagttgtaaaagctgatgcttatgtagcagcatgtgatgtccctgga 188

                                                                       
Query: 61  attaaaagattacttccatcccagtggagggaatctcagtttttcaataatatatatgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 attaaaagattacttccatcccagtggagggaatctcagtttttcaataatatatatgaa 128

                                                                       
Query: 121 ctagttggagtacctgttgtcacagtgcaacttaggtataatggctgggtcacagaattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ctagttggagtacctgttgtcacagtgcaacttaggtataatggctgggtcacagaattg 68

                                                                       
Query: 181 caggatcttgaacgatcaaggcaattgaggcaagctcttggtttagataatcttctgtac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  caggatcttgaacgatcaaggcaattgaggcaagctcttggtttagataatcttctgtac 8

                  
Query: 241 actccag 247
           |||||||
Sbjct: 7   actccag 1