Jatropha Genome Database

JcCB0157621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0157621.10 + phase: 2 /partial
         (754 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08692                                                           1027   0.0  

>KJC_c08692 
          Length = 529

 Score = 1027 bits (518), Expect = 0.0
 Identities = 528/530 (99%), Gaps = 1/530 (0%)
 Strand = Plus / Minus

                                                                       
Query: 8   gctgtacctgatccaacacaaccacatggcttaaagcttctacttgaggactatccatat 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gctgtacctgatccaacacaaccacatggcttaaagcttctacttgaggactatccatat 470

                                                                       
Query: 68  gctcaagatggtcttctaatctggtctgcaatagagaactgggtccggacctatgtgaac 127
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 469 gctcaagatggtcttctaatctggtctgcaat-gagaactgagtccggacctatgtgaac 411

                                                                       
Query: 128 cggtactacccgaattcaagcgtggtttgtaatgacaaagagttacaagcttggtatgct 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cggtactacccgaattcaagcgtggtttgtaatgacaaagagttacaagcttggtatgct 351

                                                                       
Query: 188 gagtcagtccatgtgggccatgctgatctcggccatgcagattggtggcccacattagcc 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gagtcagtccatgtgggccatgctgatctcggccatgcagattggtggcccacattagcc 291

                                                                       
Query: 248 agcgctgatgaccttacctcaatcctcaccacccttatttggcttgcatctgcacaacat 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 agcgctgatgaccttacctcaatcctcaccacccttatttggcttgcatctgcacaacat 231

                                                                       
Query: 308 gcagctctcaatttcggacagtatccctatggtggctatgtgcccaatagaccacctcta 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gcagctctcaatttcggacagtatccctatggtggctatgtgcccaatagaccacctcta 171

                                                                       
Query: 368 atgagaagactaattccagaagaaaatgaccctgaatatgaaagttttgtagctgatcct 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atgagaagactaattccagaagaaaatgaccctgaatatgaaagttttgtagctgatcct 111

                                                                       
Query: 428 caaaaatatttcctgtcagcattgccaagtctgttacaagcaacaaaatttatggctgtg 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 caaaaatatttcctgtcagcattgccaagtctgttacaagcaacaaaatttatggctgtg 51

                                                             
Query: 488 gtagacaacttatcaacacactcaccggacgaggaatacatcggtgaacg 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  gtagacaacttatcaacacactcaccggacgaggaatacatcggtgaacg 1