Jatropha Genome Database

JcCB0156631.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0156631.10 + phase: 0 
         (558 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09483                                                            509   e-144

>KJC_c09483 
          Length = 623

 Score =  509 bits (257), Expect = e-144
 Identities = 257/257 (100%)
 Strand = Plus / Minus

                                                                       
Query: 86  agtgggggaaatgggtggctgagataagagaacctaataagcggtcaaggatttggctcg 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtgggggaaatgggtggctgagataagagaacctaataagcggtcaaggatttggctcg 442

                                                                       
Query: 146 gctcctattcgactcctgtggcggcggctagggcctatgacactgcggttttctatttga 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcctattcgactcctgtggcggcggctagggcctatgacactgcggttttctatttga 382

                                                                       
Query: 206 gaggaccgtcggcgaggcttaattttcctgaatatttggcgggagaaaatatcggcggaa 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggaccgtcggcgaggcttaattttcctgaatatttggcgggagaaaatatcggcggaa 322

                                                                       
Query: 266 gttgcggagacatgtcggccgcctcaataaggaaaaaagcgaccgaggttggagctagag 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgcggagacatgtcggccgcctcaataaggaaaaaagcgaccgaggttggagctagag 262

                            
Query: 326 tcgacgctgctttaaat 342
           |||||||||||||||||
Sbjct: 261 tcgacgctgctttaaat 245



 Score =  315 bits (159), Expect = 6e-86
 Identities = 159/159 (100%)
 Strand = Plus / Minus

                                                                       
Query: 400 cgaagtagcagtagcagtagtaatagtactaataacaatagcagcagcaaccacaaatct 459
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cgaagtagcagtagcagtagtaatagtactaataacaatagcagcagcaaccacaaatct 128

                                                                       
Query: 460 gtggtggatagttcagaattcaagtcgtttgtggaacgggtcgacttgaataagatgccc 519
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gtggtggatagttcagaattcaagtcgtttgtggaacgggtcgacttgaataagatgccc 68

                                                  
Query: 520 gacccggaagactcggatgctgactgggaaaggaattag 558
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 67  gacccggaagactcggatgctgactgggaaaggaattag 29