Jatropha Genome Database
- JcCB0155391.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0155391.10 + phase: 0
(1131 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03844 1059 0.0
>KJC_c03844
Length = 1123
Score = 1059 bits (534), Expect = 0.0
Identities = 927/1054 (87%), Gaps = 23/1054 (2%)
Strand = Plus / Minus
Query: 28 cagcaacccatttatcttcatggtgacttagatttgtatatcattcaagctcgaaccttg 87
||||||||||||||||| ||||| ||||| || ||||| || ||||||||||||| |||
Sbjct: 1090 cagcaacccatttatctccatggcgacttggacttgtacattattcaagctcgaagtttg 1031
Query: 88 cctaacatggacatatt------------tcgtagttgctatgctgcttgtacacccgag 135
||||||||||| ||| | ||||||||| | | |||||||||| ||| ||
Sbjct: 1030 cctaacatggatatagtctctacacggattcgtagttgtt-tactgcttgtactccccag 972
Query: 136 tccaccacctccgcggctgctacagccactactgacaa---aacgaccggcaatgatcag 192
|| | ||||||||| |||||||| ||||||| ||| | | ||| ||||||||
Sbjct: 971 tcaaacacctccgccgctgctaccaccactaccgacgacgaagagactggcaatgaa--- 915
Query: 193 gacgagaaaattcatcaccgccggaggatagtcaatagtgacccttatgtcactgtcgtt 252
||||| ||||||||||| | ||| | ||||||| |||||||||||||||||||||||||
Sbjct: 914 gacgataaaattcatcatcaccgtaatatagtcactagtgacccttatgtcactgtcgtt 855
Query: 253 gttcctcaagctactgttgcacgaactcgtgtcgttaagaacgcaagaaaccccaagtgg 312
|||||||||||||||||||| |||| |||||| |||||||||||| || ||| |||||
Sbjct: 854 gttcctcaagctactgttgcgcgaagtcgtgtaattaagaacgcaaaaa--ccctagtgg 797
Query: 313 aaagagcggttttatattgctctagcacatcccgtaattgaccttgaatttcacgttaag 372
||| |||||||| ||||| ||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 796 aaacagcggttt-atattcctctagctcatcctctaattgaccttgaatttcatgttaaa 738
Query: 373 gataatgctcttcttagatcggagaatgtgggagttgttaaaattccggcaagaagaata 432
||||||| |||| || || | ||| | | ||| |||| || || ||||| ||||||||
Sbjct: 737 gataatgatctttttggagcagagcttataggaattgtgaagatcccggcgagaagaatc 678
Query: 433 gccactggggaagtcatcagtgattggtttcctataattggttattccggtaagccacca 492
| ||| ||||| |||| || ||||||||||||||| ||| |||||||||||| ||
Sbjct: 677 gtcaccggggagttcattgacgagtggtttcctataattagttcttccggtaagccgccg 618
Query: 493 aagccagacactgcactccatctagaaatgaaatttacgccttgtgagaagaatccattg 552
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 617 aagccagacactgcacttcatctagaaatgaaatttacgccgtgtgagaagaatccgttg 558
Query: 553 tacaagcatggcatcgccggcgatcctgaacaacggggagtgaggaatacttactttcct 612
||| ||||||||| |||||||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 557 tactggcatggcattgccggcgaccctgaacaccggggagtgacgaatacttactttcct 498
Query: 613 ttgagaaaaggaagtaaattgactatgtatcaagatgcccatgtgcttgatgatgagtta 672
||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 497 ttgaggaaaggaagtaaagtgacgatgtatcaagatgcccatgtgcttgataatgagtta 438
Query: 673 cctgagattaaaattgatgatgggaaggtttttaagcaacagaaatgttgggaagatatt 732
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 437 cctgagattagaattgatgatgggaaggttttcaagcaacagaaatgttgggaagatatt 378
Query: 733 tgttatgctatttcagaagctcaccatttgatttacgttgtgggttggtctgtgttttat 792
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 377 tgttatgctatttcagaagctcaccatttgatttacattgtgggttggtctgttttttat 318
Query: 793 aagatcaagttggttagagaacccactaggccattgcctcgaggtggggatttaacactt 852
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 317 aagattaagttggttagagaacccactaggccattgcctcgaggtggggatctaacactt 258
Query: 853 ggtgaattgcttaaatataaatctgcagaaggagttagggtgttgttgcttgtctgggat 912
|||||||||||||||||||| || | |||||||||||||| |||||||| | ||||||
Sbjct: 257 ggtgaattgcttaaatataagtccgaggaaggagttagggttttgttgctgatttgggat 198
Query: 913 gatgtaacctcacgttctatatttggtattactacgccaggattgatgaagacgcatgat 972
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gataaaacctcacgttctatatttggtattactacgccaggattgatgaagacgcatgat 138
Query: 973 gaagataccaggaagtttttcaaacattcatcggtgatttgtgtgttggcgcctcgctat 1032
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gaagataccaggaagttttctaaacattcatcggtgatttgtgtgttggcgcctcgctat 78
Query: 1033 cccagcagtaatattagct-ttttgaaacaaaag 1065
||||||||||||||||||| ||||||||||||||
Sbjct: 77 cccagcagtaatattagcttttttgaaacaaaag 44