Jatropha Genome Database

JcCB0154691.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0154691.10 - phase: 0 /partial
         (471 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07121                                                            862   0.0  

>KJC_c07121 
          Length = 505

 Score =  862 bits (435), Expect = 0.0
 Identities = 456/459 (99%), Gaps = 3/459 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgctgactcgattaatataaataagaaagtatgggacctatacttcagagatgtgctccc 74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgctgactcgattaatataaataagaaagtatgggacctatacttcagagatgtgctccc 60

                                                                       
Query: 75  aagattggtcaaggatgggaatgatggtaattgtggatcaactgctgtttgtgacacaat 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aagattggtcaaggatgggaatgatggtaattgtggatcaactgctgtttgtgacacaat 120

                                                                       
Query: 135 ctgcctgcaggttctctcaaaaagaattcattatggaaaatttgtagcagaagcaaaatt 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgcctgcaggttctctcaaaaagaattcattatggaaaatttgtagcagaagcaaaatt 180

                                                                       
Query: 195 ccgaaactctccagatgcatataaagctgctattagagcacaggacagagatagattgat 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgaaactctccagatgcatataaagctgctattagagcacaggacagagatagattgat 240

                                                                       
Query: 255 ggatttgctcacctacagcaaagttgaagaggcaataaaaaagagagtggaaatgaaagc 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggatttgctcacctacagcaaagttgaagaggcaataaaaaagagagtggaaatgaaagc 300

                                                                       
Query: 315 cataacttttggccaagaggtgacaatatgtttcggagatgaggataccgatccagtata 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cataacttttggccaagaggtgacaatatgtttcggagatgaggataccgatccagtata 360

                                                                       
Query: 375 caaaatagatcctggcttggttgcggagttgtatggggaatggatcatgccattgacaaa 434
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 361 caaaatagatcctggcttggttgcggagttgtat-gggaatggatcatgccattgacaaa 419

                                                  
Query: 435 ggaagttcaagttgaata-tttatt-aagaagattggat 471
           |||||||||||||||||| |||||| |||||||||||||
Sbjct: 420 ggaagttcaagttgaatagtttattaaagaagattggat 458