Jatropha Genome Database
- JcCB0154661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0154661.10 - phase: 0 /partial
(564 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08266 842 0.0
KJC_c01063 293 2e-79
KJC_s19634 139 8e-33
KJC_c07569 62 2e-09
KJC_c04512 54 4e-07
>KJC_c08266
Length = 724
Score = 842 bits (425), Expect = 0.0
Identities = 467/473 (98%), Gaps = 6/473 (1%)
Strand = Plus / Minus
Query: 77 aaaatagacaaatcaatgagttgagatcagctgtcaattcccatgcgggtgacgccgaac 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aaaatagacaaatcaatgagttgagatcagctgtcaattcccatgcgggtgacgccgaac 661
Query: 137 ttcgaattatcatagatggtataatggctcattatgatgaaattttcaggctgaagagca 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttcgaattatcatagatggtataatggctcattatgatgaaattttcaggctgaagagca 601
Query: 197 atgcagccaaggctgatgttttccatttgctgtctggcatgtggaagacacctgctgaga 256
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 600 atgcagccaaggctgatgttttccatttgctgtctggcatgtggaag-cacctgctgaga 542
Query: 257 ggtgtttcttgtggcttggtggcttccgttcatcagagcttctgaagcttcttgtgaatc 316
||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 541 ggtgtttct-gtggcttg-tggct-ccgtt-atcagagcttctgaagcttcttgtgaatc 486
Query: 317 aattggagcccttgactgagcagcagttggtgggcataggtaatttgcagcaatcttccc 376
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 485 aattggagcccttgactgagcagcagttggtgggcataggtaatttgcagcaatct-ccc 427
Query: 377 aacaggcagaagatgctttatctcaaggaatggaggcattgcagcagtctctggctgaga 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aacaggcagaagatgctttatctcaaggaatggaggcattgcagcagtctctggctgaga 367
Query: 437 cattatctagtggatcccttggttcatccggttcatctggaaatgtggcaaattacatgg 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cattatctagtggatcccttggttcatccggttcatctggaaatgtggcaaattacatgg 307
Query: 497 gtcagatggccatggccatgggcaagctagggactctcgaggggttcattcgt 549
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtcagatggccatggccatgggcaagctagggactctcgaggggttcattcgt 254
>KJC_c01063
Length = 1225
Score = 293 bits (148), Expect = 2e-79
Identities = 319/376 (84%)
Strand = Plus / Minus
Query: 173 atgaaattttcaggctgaagagcaatgcagccaaggctgatgttttccatttgctgtctg 232
|||||||||||||||||||| ||| |||||| || |||||||||||||| | |||| |
Sbjct: 873 atgaaattttcaggctgaagggcactgcagcgaaagctgatgttttccacatattgtcag 814
Query: 233 gcatgtggaagacacctgctgagaggtgtttcttgtggcttggtggcttccgttcatcag 292
| |||||||||||||| || ||| | |||||| ||||| ||||||||||||| ||||| |
Sbjct: 813 gtatgtggaagacaccagccgagcgttgtttcatgtggattggtggcttccgctcatctg 754
Query: 293 agcttctgaagcttcttgtgaatcaattggagcccttgactgagcagcagttggtgggca 352
| || ||||||||||||||||||||| ||||||| | |||||||| |||||| ||||||
Sbjct: 753 aactcctgaagcttcttgtgaatcaactggagcctctaactgagcaacagttgatgggca 694
Query: 353 taggtaatttgcagcaatcttcccaacaggcagaagatgctttatctcaaggaatggagg 412
| || ||||| ||||| ||||||||||||||||||||||| || ||||||||||| |
Sbjct: 693 tctacaacttgcaacaatcatcccaacaggcagaagatgctttgtcacaaggaatggaag 634
Query: 413 cattgcagcagtctctggctgagacattatctagtggatcccttggttcatccggttcat 472
|| ||||||| || |||||||||||||| | ||||| ||| |||||| || ||||| |
Sbjct: 633 cactgcagcaatccctggctgagacattggccagtggcacccctggttcgtcaggttctt 574
Query: 473 ctggaaatgtggcaaattacatgggtcagatggccatggccatgggcaagctagggactc 532
|||| ||||| ||||| || |||||||||||||||||||||||||| |||||||| || |
Sbjct: 573 ctggcaatgtagcaaactatatgggtcagatggccatggccatgggaaagctaggaacac 514
Query: 533 tcgaggggttcattcg 548
| ||||||||| ||||
Sbjct: 513 tagaggggttccttcg 498
>KJC_s19634
Length = 298
Score = 139 bits (70), Expect = 8e-33
Identities = 142/166 (85%)
Strand = Plus / Plus
Query: 383 cagaagatgctttatctcaaggaatggaggcattgcagcagtctctggctgagacattat 442
||||||||||||| || ||||||||||| ||| ||||||| || ||||||||||||||
Sbjct: 1 cagaagatgctttgtcacaaggaatggaagcactgcagcaatccctggctgagacattgg 60
Query: 443 ctagtggatcccttggttcatccggttcatctggaaatgtggcaaattacatgggtcaga 502
| ||||| ||| |||||| || ||||| ||||| ||||| ||||| || ||||||||||
Sbjct: 61 ccagtggcacccctggttcgtcaggttcttctggcaatgtagcaaactatatgggtcaga 120
Query: 503 tggccatggccatgggcaagctagggactctcgaggggttcattcg 548
|||||||||||||||| |||||||| || || ||||||||| ||||
Sbjct: 121 tggccatggccatgggaaagctaggaacactagaggggttccttcg 166
>KJC_c07569
Length = 439
Score = 61.9 bits (31), Expect = 2e-09
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 205 aaggctgatgttttccatttgctgtctggcatgtggaagacacctgctgagaggtgtttc 264
||||||||||| || ||| |||| || |||||||||||||||||||| |||| ||||||
Sbjct: 130 aaggctgatgtgtttcatatgctctcaggcatgtggaagacacctgcaaagagatgtttc 71
Query: 265 ttgtggcttggtggcttccgttcatcagagcttctgaag 303
||||| | ||||| || | || || ||||||||||||
Sbjct: 70 atgtggttgggtggttttagatcttctgagcttctgaag 32
>KJC_c04512
Length = 614
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1 ggagatcaagcccattcaatgagcgga 27
|||||||||||||||||||||||||||
Sbjct: 27 ggagatcaagcccattcaatgagcgga 1