Jatropha Genome Database
- JcCB0153301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0153301.10 + phase: 0 /partial
(1638 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09731 944 0.0
KJC_c10643 589 e-168
KJC_c07641 52 4e-06
>KJC_c09731
Length = 506
Score = 944 bits (476), Expect = 0.0
Identities = 506/511 (99%), Gaps = 5/511 (0%)
Strand = Plus / Plus
Query: 843 aaaatacaaaggtacaataacagatcaattggaagcctcctcgtctgggacatcatattg 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaatacaaaggtacaataacagatcaattggaagcctcctcgtctgggacatcatattg 60
Query: 903 tctcgatgctggaaacatccagcaaaatttctcactccccacctttggtttggatggtga 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctcgatgctggaaacatccagcaaaatttctcactccccacctttggtttggatggtga 120
Query: 963 tgtccaatcacatcctcggaacagtctgccttttgcaactaatattgagagcttggcgcc 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtccaatcacatcctcggaacagtctgccttttgcaactaatattgagagcttggcgcc 180
Query: 1023 tgatactttgttgacaaggggatatgactctcaaaaagatcttcaaaacttgctagctaa 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatactttgttgacaaggggatatgactctcaaaaagatcttcaaaacttgctagctaa 240
Query: 1083 ttatggtgggactccaagagatattgagacagaattgtccactgctgcaataagctctca 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttatggtgggactccaagagatattgagacagaattgtccactgctgcaataagctctca 300
Query: 1143 gtcatttggggtgccaatcatgcccttcaagcctggatgttcaaatgatgttgcaatcaa 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcatttggggtgccaatcatgcccttcaagcctggatgttcaaatgatgttgcaatcaa 360
Query: 1203 tgactctggggttttgaatggtggattgtgggccaatcagactcaacgcatgcgaacata 1262
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgactctggg--tttg-atggtggattgtgggccaatcagactcaacgcatgcgaacata 417
Query: 1263 tacaaaggttcaaaagcgtggctcagtgggcaggtctattgatgtcacccggtataaagg 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 418 tacaaaggttcaaaagcgtggctcagtgggcaggtctattgatgtcacccggtat-aagg 476
Query: 1323 gtatgatgaacttaggcatgacctagctcgc 1353
||||||||||||||||||||| |||||||||
Sbjct: 477 gtatgatgaacttaggcatga-ctagctcgc 506
>KJC_c10643
Length = 457
Score = 589 bits (297), Expect = e-168
Identities = 318/321 (99%), Gaps = 3/321 (0%)
Strand = Plus / Minus
Query: 411 ttccccttcaagctcacctttgcaacctcaattgatacaacagcagacccatcaacaaaa 470
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 318 ttccccttcaagctcacctttgcaac-tcaattgatacaacagcagacccatca-caaaa 261
Query: 471 cctgcagttccagcagtcaactatttcacagagccagcagcaaccactcggtagcaacag 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cctgcagttccagcagtcaactatttcacagagccagcagcaaccactcggtagcaacag 201
Query: 531 cttctcaacggcagcactcatgcaatcacaatcttttcctgtcagccagcaccatgccct 590
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 200 cttctcaacggcagcactcatgcaatcacaatcttt-cctgtcagccagcaccatgccct 142
Query: 591 tcagaaatctccaacaattagagctcattccactcttacagatggagatgctccatcttg 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tcagaaatctccaacaattagagctcattccactcttacagatggagatgctccatcttg 82
Query: 651 ttcaacctcaccatccactaataattgccagattgcaccatcaaatttcctgaacagaaa 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ttcaacctcaccatccactaataattgccagattgcaccatcaaatttcctgaacagaaa 22
Query: 711 ccaacaagcacctgctatatt 731
|||||||||||||||||||||
Sbjct: 21 ccaacaagcacctgctatatt 1
Score = 157 bits (79), Expect = 1e-37
Identities = 91/94 (96%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 286 caatcacagtcacagccacaagcgcaacaact--gtcgcagcctggcctctcagatcaac 343
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 443 caatcacagtcacagccacaagcgcaacaacctagtcgcagcctggcctctcagatcaac 384
Query: 344 agcttcacttgcagttgctgcagaaacttcagca 377
||||||||||||||||||||||||||||||||||
Sbjct: 383 agcttcacttgcagttgctgcagaaacttcagca 350
>KJC_c07641
Length = 633
Score = 52.0 bits (26), Expect = 4e-06
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 1252 atgcgaacatatacaaaggttcaaaagcgtggctcagtgggcaggtctattgatgtcacc 1311
||||||||||||||||||||| | || || || | ||||| ||||| |||||| | |||
Sbjct: 515 atgcgaacatatacaaaggtttacaaacgcggagctgtgggaaggtcaattgatataacc 574
Query: 1312 cggtataaagggtatgatgaacttaggcatgacctagctcgcatgtttgg 1361
|||||| || |||||||| |||| ||| ||||| ||||| | ||||||
Sbjct: 575 cggtattcagattatgatgagcttaagcaagacctggctcggaggtttgg 624