Jatropha Genome Database

JcCB0150901.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0150901.10 + phase: 0 /pseudo/partial
         (771 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07844                                                           1059   0.0  

>KJC_c07844 
          Length = 549

 Score = 1059 bits (534), Expect = 0.0
 Identities = 548/550 (99%), Gaps = 2/550 (0%)
 Strand = Plus / Minus

                                                                       
Query: 158 ggttatcaacttgcactagagattgagaaggcatggaacaaagcattgaatcaggaaccc 217
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 548 ggttatcaacttgcactagagattgagaaggcatggaacaaagcat-gaatcaggaaccc 490

                                                                       
Query: 218 ccattgatattgtttcgtctctaaaaagctacgagagagccagaagacttcgagttgcca 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccattgatattgtttcgtctctaaaaagctacgagagagccagaagacttcgagttgcca 430

                                                                       
Query: 278 tcatccatggaatggcaagaatggctgcgattatggcctcaacttacaaggcttatttgg 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tcatccatggaatggcaagaatggctgcgattatggcctcaacttacaaggcttatttgg 370

                                                                       
Query: 338 gtgtaggccttggtccattgtcgttcttgaccaagtatcgaataccacatcctggaagag 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtgtaggccttggtccattgtcgttcttgaccaagtatcgaataccacatcctggaagag 310

                                                                       
Query: 398 ttggtgggaggttttttattgacatagcaatgcctgtaatgctcagttgggtgttaggtg 457
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttggtgggaggttttt-attgacatagcaatgcctgtaatgctcagttgggtgttaggtg 251

                                                                       
Query: 458 gcaacagttcaaaacttgaagggagatctcaatgttgcagactttcagacaaagctagtg 517
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcaacagttcaaaacttgaagggagatctcaatgttgcagactttcagacaaagctagtg 191

                                                                       
Query: 518 accaattacggacatggtttgaagatgatgatgcgctagaacgtgctctcaatgcagagt 577
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 accaattacggacatggtttgaagatgatgatgcgctagaacgtgctctcaatgcagagt 131

                                                                       
Query: 578 ggtttcttttaccgttgggaaataaggtggttgtttcagaacctatctgtttaagcagga 637
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggtttcttttaccgttgggaaataaggtggttgtttcagaacctatctgtttaagcagga 71

                                                                       
Query: 638 atgagaacacaccctgtgttgttgggaaggtatcacataaagatttccctggaatgtcta 697
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  atgagaacacaccctgtgttgttgggaaggtatcacataaagatttccctggaatgtcta 11

                     
Query: 698 tagtcatacc 707
           ||||||||||
Sbjct: 10  tagtcatacc 1