Jatropha Genome Database

JcCB0150201.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0150201.10 + phase: 0 /partial
         (357 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01697                                                            708   0.0  

>KJC_c01697 
          Length = 1644

 Score =  708 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccggatagagtaatggaattctgcaacaacaatgatctgcagttaattgtacgtgcccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ccggatagagtaatggaattctgcaacaacaatgatctgcagttaattgtacgtgcccat 611

                                                                       
Query: 61  gaatgtgtgatggatggctttgaacggtttgcccagggacatctaatcacacttttctca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gaatgtgtgatggatggctttgaacggtttgcccagggacatctaatcacacttttctca 551

                                                                       
Query: 121 gccaccaattactgtggtactgccaataatgctggggcaattttagttttgggaagagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gccaccaattactgtggtactgccaataatgctggggcaattttagttttgggaagagat 491

                                                                       
Query: 181 cttgtggtggttccaaaactaattcatcccttaccacctgcgatctcctcgcctgaaact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cttgtggtggttccaaaactaattcatcccttaccacctgcgatctcctcgcctgaaact 431

                                                                       
Query: 241 tcacctgaacgccacattgaagatacatggatgcaggaattgaatgctaaccgacctcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tcacctgaacgccacattgaagatacatggatgcaggaattgaatgctaaccgacctcct 371

                                                                    
Query: 301 acaccaacaagaggtcgtcctcaagtagcaaatgatcggggatctcttgcatggata 357
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 acaccaacaagaggtcgtcctcaagtagcaaatgatcggggatctcttgcatggata 314