Jatropha Genome Database
- JcCB0149951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0149951.10 + phase: 1 /partial
(587 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06489 547 e-155
KJC_c08105 517 e-147
KJC_s19041 66 1e-10
KJC_c00600 58 2e-08
>KJC_c06489
Length = 536
Score = 547 bits (276), Expect = e-155
Identities = 283/284 (99%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 304 cttgcaatggcttacttctcaaggttaatcagattggctcagtgactgagtccattagag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cttgcaatggcttacttctcaaggttaatcagattggctcagtgactgagtccattagag 477
Query: 364 cagcacttgactcaaaagcagcaggttggggcgtgatggtcagccaccgaagtggtgaaa 423
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cagcacttgactcaaa-gcagcaggttggggcgtgatggtcagccaccgaagtggtgaaa 418
Query: 424 ccgaggataacttcattgctgatctttctgttggcttagctagtggacagatcaagactg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ccgaggataacttcattgctgatctttctgttggcttagctagtggacagatcaagactg 358
Query: 484 gagctccttgcagaagtgagcggttggccaagtataatcagcttctgcggattgaagagg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gagctccttgcagaagtgagcggttggccaagtataatcagcttctgcggattgaagagg 298
Query: 544 aacttggaaatgtacgatatgcaggcgaagctttcagatcccct 587
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aacttggaaatgtacgatatgcaggcgaagctttcagatcccct 254
>KJC_c08105
Length = 743
Score = 517 bits (261), Expect = e-147
Identities = 274/277 (98%), Gaps = 1/277 (0%)
Strand = Plus / Minus
Query: 7 agatcaaaattggaatggatgttgctgcttcagagttccttacaaaggacggaaaatatg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 agatcaaaattggaatggatgttgctgcttcagagttccttacaaaggacggaaaatatg 218
Query: 67 atttgaactttaagaaacaaccaaatgatggggctcatgtgctgtcagctcagaatcttg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atttgaactttaagaaacaaccaaatgatggggctcatgtgctgtcagctcagaatcttg 158
Query: 127 gtgaactctataaggaattcatcaaggatttccctattgtatctattgaagatcctttcg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gtgaactctataaggaattcatcaaggatttccctattgtatctattgaagatcctttcg 98
Query: 187 accaggatgattggagttcatgggcttcgctgcagtcttcagttga-tatccaacttgtc 245
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 97 accaggatgattggagttcatgggcttcgctgcagtcttcagttgactatccaacttgtc 38
Query: 246 ggggatgatttgttggtcacaaatccaaagagaatag 282
|||||||||||||||||||||| |||||||||||||
Sbjct: 37 ggggatgatttgttggtcacaataccaaagagaatag 1
>KJC_s19041
Length = 411
Score = 65.9 bits (33), Expect = 1e-10
Identities = 79/93 (84%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 405 agccaccgaagtggtgaaaccgaggataacttcattgctgatctttctgttggcttagct 464
|||||| | ||||||||||| || |||| |||||| || ||||| |||||||| || ||
Sbjct: 304 agccacaggagtggtgaaactgaagata-cttcatagcagatctctctgttggattggcc 246
Query: 465 agtggacagatcaagactggagctccttgcaga 497
| || |||||||||||||||||||||||||||
Sbjct: 245 acgggtcagatcaagactggagctccttgcaga 213
>KJC_c00600
Length = 1669
Score = 58.0 bits (29), Expect = 2e-08
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 405 agccaccgaagtggtgaaaccgaggataacttcattgctgatctttctgttggcttagct 464
|||||| | ||||||||||| || |||| ||||| || ||| | |||||||| || ||
Sbjct: 490 agccacaggagtggtgaaactgaagatactttcatagcagatttgtctgttggattggcc 431
Query: 465 agtggacagatcaagactggagctccttgcaga 497
| |||||||||||||| |||||||||||||||
Sbjct: 430 acgggacagatcaagaccggagctccttgcaga 398