Jatropha Genome Database
- JcCB0144511.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0144511.10 + phase: 0 /partial
(1086 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06550 1239 0.0
>KJC_c06550
Length = 846
Score = 1239 bits (625), Expect = 0.0
Identities = 628/629 (99%)
Strand = Plus / Minus
Query: 1 atggcaccctcgttcgattggtgggctaaggagggccatagaggcacacccgtcgtggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 atggcaccctcgttcgattggtgggctaaggagggccatagaggcacacccgtcgtggtc 704
Query: 61 aaaatggagaaccccaactggtcaatggtcgagctagagggtccatccgaggaagatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aaaatggagaaccccaactggtcaatggtcgagctagagggtccatccgaggaagatttc 644
Query: 121 atcatcggcgccaactccccggcgcgtacaagggataagtctcgcaacaagaacgccaag 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 atcatcggtgccaactccccggcgcgtacaagggataagtctcgcaacaagaacgccaag 584
Query: 181 cagctaacatgggttcttctcctcaaagcccacaaggctgccggttgtttaacctccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cagctaacatgggttcttctcctcaaagcccacaaggctgccggttgtttaacctccatt 524
Query: 241 gcctccgcaatggtctccctgggctcgtccatcaagcgtcgtctccgctctggccgcacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gcctccgcaatggtctccctgggctcgtccatcaagcgtcgtctccgctctggccgcacc 464
Query: 301 gacaccgacacagaaggtgacgccgatatcgaccgggtaaatgaggacccaactgtcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gacaccgacacagaaggtgacgccgatatcgaccgggtaaatgaggacccaactgtcaga 404
Query: 361 acgcggttctactcctgtatcaaggtgtttttatggctatcagttttacttctagggttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 acgcggttctactcctgtatcaaggtgtttttatggctatcagttttacttctagggttc 344
Query: 421 gagatggctgcctatttcaagggctggcattttggtgctccacatctccaattgcagtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gagatggctgcctatttcaagggctggcattttggtgctccacatctccaattgcagtac 284
Query: 481 ttattagccacgccgtttgggtttaaagacattttcgattcgttgtattctcggtgggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttattagccacgccgtttgggtttaaagacattttcgattcgttgtattctcggtgggtt 224
Query: 541 ttgattcgcgtggagtatctcgctcctccattgcaattcctcgccaatgtatgtattgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttgattcgcgtggagtatctcgctcctccattgcaattcctcgccaatgtatgtattgtg 164
Query: 601 ctcttccttatccagagtttggataggct 629
|||||||||||||||||||||||||||||
Sbjct: 163 ctcttccttatccagagtttggataggct 135
Score = 270 bits (136), Expect = 7e-72
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 639 cttgggttgtttctggatccgatttaagaagataaaacccattcccaaacaagacgcagt 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgggttgtttctggatccgatttaagaagataaaacccattcccaaacaagacgcagt 60
Query: 699 tgctgatcttgagtccggtgaaaatggcttcttccctatggttcttgtccaaatccccat 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctgatcttgagtccggtgaaaatggcttcttccctatggttcttgtccaaatccccat 120
Query: 759 gtgcaatgagaaagag 774
||||||||||||||||
Sbjct: 121 gtgcaatgagaaagag 136