Jatropha Genome Database

JcCB0143751.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0143751.20 + phase: 0 
         (408 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04405                                                             76   7e-14

>KJC_c04405 
          Length = 686

 Score = 75.8 bits (38), Expect = 7e-14
 Identities = 100/118 (84%), Gaps = 2/118 (1%)
 Strand = Plus / Plus

                                                                       
Query: 166 agctgggcttcaaaaaagtttatgacaggatgtgtcattcttctt-ccaatagccgtcac 224
           |||||||||||||||||||| ||||| |||||||| | |||| || |||||||| |||||
Sbjct: 390 agctgggcttcaaaaaagttcatgactggatgtgt-aatcttattcccaatagctgtcac 448

                                                                     
Query: 225 attctacgtcacttggggttttgttcattttgtggatggtttcttctctccagtctat 282
            ||||| || || ||| | ||| |||||||||| ||||| || ||||||||| |||||
Sbjct: 449 tttctatgtaacatggtggtttattcattttgttgatggatttttctctccaatctat 506