Jatropha Genome Database
- JcCB0143751.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0143751.10 + phase: 2 /pseudo/partial
(853 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08894 728 0.0
KJC_c02995 145 2e-34
>KJC_c08894
Length = 638
Score = 728 bits (367), Expect = 0.0
Identities = 424/441 (96%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 1 cctagttatggagatttgatgaaaggnttattagacntttaacaatgccacgaattcgcc 60
|||||||||||||||||||||||||| |||| || | |||||||||||||||||||||||
Sbjct: 442 cctagttatggagatttgatgaaaggattat-ag-catttaacaatgccacgaattcgcc 385
Query: 61 tttcgcaatcaatccatacccgtattttgcttacaggagcgatccaaggcccgagacttt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 384 tttcgcaatcaatccatacccgtattttgcttacaggagcgatccaacgcccgagacttt 325
Query: 121 ggctttttgtcttttccaaccgaatgcaggacgttttgatgcaaatacaaagatcaacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 324 ggctttttgtcttttccaaccgaatgcaggacgttttgatgcaaatacaaacatcaacta 265
Query: 181 catgaacatgtttgatgctcaggtagatgctgttcattctgctttaagctccatgggatt 240
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 264 catgaacatgtttgatgctcaagtagacgctgttcattctgctttaagctccatgggatt 205
Query: 241 taagaacgttgagattgtggtggcagagactggatggccttataagggagacaataatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 204 taagaacgttgagattgtggtggcagagactggatggccttataagggagatgacaatga 145
Query: 301 agtagggccaagtatggagaatgctaaggcttacaatggtaacttaattgcacaccttag 360
|||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 144 agtaggaccaagtattgagaatgctaaggcttataatggtaatttaattgcacaccttag 85
Query: 361 atcaatggtgggtactccattgatgcctggaaaatcagtagatacatatctttttgcttt 420
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 84 atcaatggtgggtactccattgatgcctgggaaatcagtagatacatatctgtttgcttt 25
Query: 421 atatgatgaagacttgaaacc 441
|||||||||||||||||||||
Sbjct: 24 atatgatgaagacttgaaacc 4
>KJC_c02995
Length = 685
Score = 145 bits (73), Expect = 2e-34
Identities = 266/329 (80%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 179 tacatgaacatgtttgatgctcaggtagatgctgttcattctgctttaagctccatggga 238
||||||||||||||||| |||||||| |||||||||| ||||| |||| | || |||
Sbjct: 486 tacatgaacatgtttgacgctcaggtggatgctgttcggtctgcattaaatgcaatcgga 427
Query: 239 tttaagaacgttgagattgtggtggcagagactggatggccttataagggagacaataat 298
|| ||| | |||||||| ||||| | |||||||| |||||||||| || |||| |||
Sbjct: 426 ttcaaggatattgagattttggtg-ctgagactggttggccttatagtggtgacagcaat 368
Query: 299 gaagtagggccaagtatggagaatgctaaggcttacaatggtaacttaattgcacacctt 358
||||||||||| ||||| || ||||| | ||||| ||||| || || ||| ||||||
Sbjct: 367 gaagtagggcctagtattgaaaatgcaagagcttataatggcaatttgattaatcacctt 308
Query: 359 agatcaatggtgggtactccattgatgcctggaaaatcagtagatacatatctttttgct 418
||| || |||| ||||| ||||| ||||| |||||||| ||||||||||| || |||||
Sbjct: 307 agaacattggttggtaccccattaatgcccggaaaatctgtagatacatacctctttgca 248
Query: 419 ttatatgatgaagacttgaaacccggacctggttcagagcgagcattcggacttttcaag 478
| ||||||||||| ||||| ||||||||| || || ||||||| || ||||||||
Sbjct: 247 ctctatgatgaagatttgaagcccggaccttcctctgaaagagcatttggccttttcaaa 188
Query: 479 cctgatcttacgatgacttatgatgttgg 507
|||||||| | ||||| |||||||||||
Sbjct: 187 actgatctttctatgacatatgatgttgg 159