Jatropha Genome Database
- JcCB0142901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0142901.10 + phase: 0 /pseudo/partial
(1066 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02229 759 0.0
KJC_c03075 757 0.0
>KJC_c02229
Length = 1235
Score = 759 bits (383), Expect = 0.0
Identities = 389/391 (99%)
Strand = Plus / Minus
Query: 21 agcttggagaaccttctctgtcttcccttcctggcactccttcttgcaatcctcatggtg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agcttggagaaccttctctgtcttcccttcctggcactccttcttgcaatcctcatggtg 616
Query: 81 accccccaattttatggtgactgttggtacaactgcactttggatgatatttctggagag 140
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 acccccccaatttatggtgactgttggtacaactgcactttggatgatatttctggagag 556
Query: 141 gacaaaaggcatcgccttcataaggctttggggcagacagctgattggtttaaaagagca 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gacaaaaggcatcgccttcataaggctttggggcagacagctgattggtttaaaagagca 496
Query: 201 ctagctgttgagcctgtgaaggggaaattgcggttgagtggatattctgcttgtggacaa 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctagctgttgagcctgtgaaggggaaattgcggttgagtggatattctgcttgtggacaa 436
Query: 261 gatggaggtgtgcaacttccacgcgaatatgttgaagagggtgttgctgacacggactta 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gatggaggtgtgcaacttccacgcgaatatgttgaagagggtgttgctgacacggactta 376
Query: 321 gttttgttggtgacgacaagacctacaacaggcaacactcttgcatgggcagtggcatgt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gttttgttggtgacgacaagacctacaacaggcaacactcttgcatgggcagtggcatgt 316
Query: 381 gaacgtgatcagtggggtcgtgcaattgctg 411
|||||||||||||||||||||||||||||||
Sbjct: 315 gaacgtgatcagtggggtcgtgcaattgctg 285
Score = 509 bits (257), Expect = e-144
Identities = 257/257 (100%)
Strand = Plus / Minus
Query: 410 tgactgcagaggcagagactttactttcagctacgctaatccacgaggtcatgcacgttc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgactgcagaggcagagactttactttcagctacgctaatccacgaggtcatgcacgttc 198
Query: 470 ttggttttgatccccatgcctttgcccattttagggacgataggaaaagaaggcgtggtc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttggttttgatccccatgcctttgcccattttagggacgataggaaaagaaggcgtggtc 138
Query: 530 aggttacagaacaagtcatggatgaaaagcttgggcggatggtaacacgtgtggtgcttc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aggttacagaacaagtcatggatgaaaagcttgggcggatggtaacacgtgtggtgcttc 78
Query: 590 cacgtgttgtaatgcactcacggcatcattatggggcattctctgagaattttactggtt 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cacgtgttgtaatgcactcacggcatcattatggggcattctctgagaattttactggtt 18
Query: 650 tagaacttgaagacggg 666
|||||||||||||||||
Sbjct: 17 tagaacttgaagacggg 1
>KJC_c03075
Length = 802
Score = 757 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Plus
Query: 685 tctgtggatacaagatctgtagtttcaaaaatgacactggctttattggaggatagcggg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tctgtggatacaagatctgtagtttcaaaaatgacactggctttattggaggatagcggg 124
Query: 745 tggtatcaagctaactatagtatggcagaccgtcttgattggggtcgcaaccaaggaact 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tggtatcaagctaactatagtatggcagaccgtcttgattggggtcgcaaccaaggaact 184
Query: 805 gattttgtcaccttgccttgcaatctctggaagggggcatatcattgcaacacaacccaa 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gattttgtcaccttgccttgcaatctctggaagggggcatatcattgcaacacaacccaa 244
Query: 865 ttgtcaggctgtacatacaacagggaggcagagggatattgccctattgtaagttatacc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttgtcaggctgtacatacaacagggaggcagagggatattgccctattgtaagttatacc 304
Query: 925 ggggacctccctcagtgggctcgctactttccacagccaaataaaggtgggcagtcctct 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggggacctccctcagtgggctcgctactttccacagccaaataaaggtgggcagtcctct 364
Query: 985 ttggctgattattgcacttacttcgtggcctactctgatggatcatgcacagacactaac 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttggctgattattgcacttacttcgtggcctactctgatggatcatgcacagacactaac 424
Query: 1045 agtgcacgggcacctgacagaa 1066
||||||||||||||||||||||
Sbjct: 425 agtgcacgggcacctgacagaa 446