Jatropha Genome Database

JcCB0139081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0139081.10 + phase: 1 /partial
         (422 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10052                                                            262   6e-70

>KJC_c10052 
          Length = 342

 Score =  262 bits (132), Expect = 6e-70
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                       
Query: 98  agcaagacctgcaaaacttgttagagactgtgaaatgattgcaccatgtggcacaacagt 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agcaagacctgcaaaacttgttagagactgtgaaatgattgcaccatgtggcacaacagt 73

                                                                       
Query: 158 tctttatcccagtagtggtggcaacatacattgtttcaaagccttgacaccctgtgctct 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  tctttatcccagtagtggtggcaacatacattgtttcaaagccttgacaccctgtgctct 13

                       
Query: 218 cttcgacgttct 229
           ||||||||||||
Sbjct: 12  cttcgacgttct 1