Jatropha Genome Database
- JcCB0138981.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0138981.10 + phase: 0
(954 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02915 809 0.0
KJC_c00215 70 1e-11
KJC_c02206 60 1e-08
KJC_c00598 56 2e-07
>KJC_c02915
Length = 606
Score = 809 bits (408), Expect = 0.0
Identities = 497/524 (94%), Gaps = 27/524 (5%)
Strand = Plus / Plus
Query: 1 atggctagtgctcttggtttgcttgctgttagcggcagcggcggttgcagtggcggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggctagtgctcttggtttgcttgctgttagcggcagcggcggttgcagtggcggttct 144
Query: 61 tctggggtctcaacaaatgagtctgctgtgtcaaaggtggaagtggtggatgctgaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tctggggtctcaacaaatgagtctgctgtgtcaaaggtggaagtggtggatgctgaggct 204
Query: 121 agttcatatccagtagaggctgagctagagctgggtcttggcctgagtcttggcggcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agttcatatccagtagaggctgagctagagctgggtcttggcctgagtcttggcggcagc 264
Query: 181 agcggtagtggcggagggaagagtaagacaaacggatggggtgagtgtgggagaatcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcggtagtggcggagggaagagtaagacaaacggatggggtgagtgtgggagaatcctg 324
Query: 241 actgccaaggactttccttctgtggttactcagtcccatagagttaataataatagtaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actgccaaggactttccttctgtggttactcagtcccatagagttaataataatagtaat 384
Query: 301 gataatggcacaacttctggttgtgttgtcggtgctatttctggtactaaaagagctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gataatggcacaacttctggttgtgttgtcggtgctatttctggtactaaaagagctgct 444
Query: 361 gagcctgtttccaatgaaggtggatcccctacttctgt---------------------c 399
||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 445 gagcctg-ttccaatgaaggtggat-ccctacttctgtcagtaaattgctttgtgggagc 502
Query: 400 agtcaggttgtgggatggccacctataagggcttataggatcaacagcttggt-gaacca 458
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 503 agtcaggttgtgggatggccacctataagggcttataggatcaacagcttggtagaacca 562
Query: 459 agcc-aaggctt-caagatct-gaagaagacaagtcagttgatg 499
|||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 563 agccaaaggcttacaagatctagaagaagacaagtcagttgatg 606
>KJC_c00215
Length = 1768
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 783 tgttctcacttatgaagataaagaaggagattggatgcttgtcggagatgttccatgggg 842
|||||| || ||||| |||||||| || |||||||||||||| || |||||||||||||
Sbjct: 1220 tgttcttacatatgaggataaagatggtgattggatgcttgttggtgatgttccatggga 1279
Query: 843 gatgttc 849
|||||||
Sbjct: 1280 gatgttc 1286
>KJC_c02206
Length = 817
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 783 tgttctcacttatgaagataaagaaggagattggatgcttgtcggagatgttccatgggg 842
||||||||| ||||||||||| || || || |||||||||||||| ||||| || ||||
Sbjct: 404 tgttctcacatatgaagataaggacggtgactggatgcttgtcggcgatgtgccctggga 345
Query: 843 gatgtt 848
||||||
Sbjct: 344 gatgtt 339
>KJC_c00598
Length = 889
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 790 acttatgaagataaagaaggagattggatgcttgtcggagatgt 833
||||||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 183 acttatgaagacaaagatggagactggatgcttgtaggagatgt 140