Jatropha Genome Database
- JcCB0134051.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0134051.10 + phase: 0
(933 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00213 1772 0.0
KJC_c10516 333 5e-91
KJC_c01777 202 1e-51
KJC_s13129 74 7e-13
KJC_c07721 50 1e-05
>KJC_c00213
Length = 1775
Score = 1772 bits (894), Expect = 0.0
Identities = 919/925 (99%), Gaps = 3/925 (0%)
Strand = Plus / Minus
Query: 10 gggagttgctgggcattctcaacaatttctgctgtggaagggatcaacaagattgtcacc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 gggagttgctgggcattctcaacaatttctgctgtggaagggatcaacaagattgtcacc 1183
Query: 70 ggcgacctgatctctctatctgagcaggagttggtggattgtgatacctcttataatcaa 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 ggcgacctgatctctctatctgagcaggagttggtggattgtgatacctcttataatcaa 1123
Query: 130 ggatgcaatggaggtctgatggactatggctttcaatttattatcaacaatggtggcatt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 ggatgcaatggaggtctgatggactatggctttcaatttattatcaacaatggtggcatt 1063
Query: 190 gatactgaagaagattacccttaccttgctcgtgatggcagatgcgacacatacaggaaa 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 gatactgaagaagattacccttaccttgctcgtgatggcagatgcgacacatacaggaaa 1003
Query: 250 aatgccaaggttgttacaattgatgattatgaagatgtacctgttaataatgaggaggcg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 aatgccaaggttgttacaattgatgattatgaagatgtacctgttaataatgaggaggcg 943
Query: 310 ctaaaaaaggcggttgcaaatcagccagtgagtattgcaattgaagctggcggcagagaa 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 ctaaaaaaggcggttgcaaatcagccagtgagtattgcaattgaagctggcggcagagaa 883
Query: 370 ttccagttttactcatcgggtatctttacaggaaaatgtggaacttccctggatcatggt 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 ttccagttttactcatcgggtatctttacaggaaaatgtggaacttccctggatcatggt 823
Query: 430 gttgttgccgttggttatggtacagaaaatggtaaagatttctggattgtcaggaactca 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gttgttgccgttggttatggtacagaaaatggtaaagatttctggattgtcaggaactca 763
Query: 490 tggggaaaaagctggggcgaagatggctacctcaggatggagagaaatattcagagtcca 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tggggaaaaagctggggcgaagatggctacctcaggatggagagaaatattcagagtcca 703
Query: 550 acaggaaaatgtggaattgcaatggaggcatcttatccaatcaagaagggccaaaatccc 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 acaggaaaatgtggaattgcaatggaggcatcttatccaatcaagaagggccaaaatccc 643
Query: 610 ccaaatcctggcccttctcccccatccccagtaaagcctccatctgtatgtgacaattat 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ccaaatcctggcccttctcccccatccccagtaaagcctccatctgtatgtgacaattat 583
Query: 670 tatagctgccctgagggcaacacttgttgctgcatctttgagtatgggaactactgcttt 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tatagctgccctgagggcaacacttgttgctgcatctttgagtatgggaactactgcttt 523
Query: 730 gaatggggatgttgcccacttgagggtgctacctgctgtgaagaccattatagttgctgc 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gaatggggatgttgcccacttgagggtgctacctgctgtgaagaccattatagttgctgc 463
Query: 790 ccaaaagaatatcccgtctgtaacattaaccagggaacttgcttaatgagcaaggacaat 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ccaaaagaatatcccgtctgtaacattaaccagggaacttgcttaatgagcaaggacaat 403
Query: 850 ccattaggagtgaaggcaatgaggcgcact-cgtgccttgcctcattgggctcttgcaaa 908
|||||||||||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct: 402 ccattaggagtgaaggca--tagccgcactgtgtgccttgcctcattgggctcttgcaaa 345
Query: 909 tggaagcaagaagagcagtgcttag 933
|||||||||||||||||||||||||
Sbjct: 344 tggaagcaagaagagcagtgcttag 320
>KJC_c10516
Length = 287
Score = 333 bits (168), Expect = 5e-91
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 436 gccgttggttatggtacagaaaatggtaaagatttctggattgtcaggaactcatgggga 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 gccgttggttatggtacagaaaatggtaaagatttctggattgtcaggaactcatgggga 99
Query: 496 aaaagctggggcgaagatggctacctcaggatggagagaaatattcagagtccaacagga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 aaaagctggggcgaagatggctacctcaggatggagagaaatattcagagtccaacagga 159
Query: 556 aaatgtggaattgcaatggaggcatcttatccaatcaagaagggccaa 603
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aaatgtggaattgcaatggaggcatcttatccaatcaagaagggccaa 207
>KJC_c01777
Length = 1112
Score = 202 bits (102), Expect = 1e-51
Identities = 390/486 (80%)
Strand = Plus / Minus
Query: 9 tgggagttgctgggcattctcaacaatttctgctgtggaagggatcaacaagattgtcac 68
||||||||||||||| |||||||| || |||| || |||||||| ||| ||||||| ||
Sbjct: 1008 tgggagttgctgggctttctcaactgttgctgcagtagaagggattaaccagattgtaac 949
Query: 69 cggcgacctgatctctctatctgagcaggagttggtggattgtgatacctcttataatca 128
|| || || ||||||||||| |||||||||||||| |||||||||| || ||||| ||
Sbjct: 948 tggtgatctaatctctctatcagagcaggagttggtagattgtgatagatcatataacca 889
Query: 129 aggatgcaatggaggtctgatggactatggctttcaatttattatcaacaatggtggcat 188
||||||||||||||||| |||||||||| |||| ||||||||||| | |||||||| ||
Sbjct: 888 gggatgcaatggaggtcttatggactatgcctttgaatttattatccaaaatggtggtat 829
Query: 189 tgatactgaagaagattacccttaccttgctcgtgatggcagatgcgacacatacaggaa 248
|||||||||| |||||||||| || ||| |||| || || ||||||||||
Sbjct: 828 tgatactgaacaagattacccatatgaggctgttgataatgtttgtgatccatacaggaa 769
Query: 249 aaatgccaaggttgttacaattgatgattatgaagatgtacctgttaataatgaggaggc 308
|||||| ||||| ||||| ||||||| ||||||||||| |||| ||| ||||| | |
Sbjct: 768 aaatgctaaggtagttactattgatggatatgaagatgttcctgaaaatgatgagaaatc 709
Query: 309 gctaaaaaaggcggttgcaaatcagccagtgagtattgcaattgaagctggcggcagaga 368
| || ||||| || |||||||||||||| ||| |||| ||||||||||| ||||| |
Sbjct: 708 cttgaagaaggctgtggcaaatcagccagttagtgttgccattgaagctggtggcagggc 649
Query: 369 attccagttttactcatcgggtatctttacaggaaaatgtggaacttccctggatcatgg 428
||||| ||||| ||||||| | ||||| || | |||||| || || || |||||
Sbjct: 648 tttccaactttaccaatcgggtgtttttactggtagatgtggtacacagcttgaccatgg 589
Query: 429 tgttgttgccgttggttatggtacagaaaatggtaaagatttctggattgtcaggaactc 488
||| | ||| ||||| ||||| ||||| |||||| ||||| |||| | || ||||||||
Sbjct: 588 tgtggctgctgttggatatggcacagagaatggtgtagattactggttggtgaggaactc 529
Query: 489 atgggg 494
||||||
Sbjct: 528 atgggg 523
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 548 caacaggaaaatgtggaattgcaatggaggcatcttatccaatcaagaagggccaaaatc 607
|||| |||||||||||||||||| ||||||| || ||||||| ||||||||| | |||||
Sbjct: 466 caactggaaaatgtggaattgcagtggaggcttcatatccaaccaagaagggtccaaatc 407
Query: 608 ccccaaatcctggccc 623
|||| |||||||||||
Sbjct: 406 cccctaatcctggccc 391
Score = 77.8 bits (39), Expect = 4e-14
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 697 tgctgcatctttgagtatgggaactactgctttgaatggggatgttgcccacttgagggt 756
|||||||| | ||||||||| | ||| ||||||| ||||||||| ||||| |||||| |
Sbjct: 302 tgctgcatatatgagtatggtagctattgctttggatggggatgctgccctcttgagtct 243
Query: 757 gctacctgctgtgaagaccattatagttgctgccc 791
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 242 gcaacctgctgtgatgaccactatagctgctgccc 208
>KJC_s13129
Length = 49
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 881 gtgccttgcctcattgggctcttgcaaatggaagcaa 917
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 gtgccttgcctcattgggctcttgcaaatggaagcaa 1
>KJC_c07721
Length = 760
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 556 aaatgtggaattgcaatggaggcatcttatccaatcaagaa 596
|||||||||||||||||| | | |||||||||||||||||
Sbjct: 447 aaatgtggaattgcaatgcaatcttcttatccaatcaagaa 487