Jatropha Genome Database
- JcCB0131911.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0131911.20 + phase: 0 /partial
(563 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04454 1094 0.0
>KJC_c04454
Length = 1123
Score = 1094 bits (552), Expect = 0.0
Identities = 559/560 (99%), Gaps = 1/560 (0%)
Strand = Plus / Plus
Query: 1 atgaagtcttatcagttgtcagaactcagtcgtactgaggttgagagccttaaagctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atgaagtcttatcagttgtcagaactcagtcgtactgaggttgagagccttaaagctcgt 171
Query: 61 cctcgaatagatttcttttcaatttt-cagtattgtcacccccattgttgacgatgtacg 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 172 cctcgaatagatttcttttcaatttttcagtattgtcacccccattgttgacgatgtacg 231
Query: 120 cagcagaggtgatgctgctgttaaagattataccacaagatttgacaaagtaaagttgga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cagcagaggtgatgctgctgttaaagattataccacaagatttgacaaagtaaagttgga 291
Query: 180 gaagattgttgaggatgtatctgagcttcctgacccagagcttgatgcggctgttaggga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gaagattgttgaggatgtatctgagcttcctgacccagagcttgatgcggctgttaggga 351
Query: 240 agcatttgatgtggcatatgataacatttatgcatttcatcttgctcaaaaagcagctga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agcatttgatgtggcatatgataacatttatgcatttcatcttgctcaaaaagcagctga 411
Query: 300 aaaaagtgttgaaaacatgcaaggtgttagatgcaaaagggtgccaaggtgcatttcttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaaaagtgttgaaaacatgcaaggtgttagatgcaaaagggtgccaaggtgcatttcttc 471
Query: 360 tgtaggtctttatgttcctgggggaactgcagttttaccttcaacagctctgatgctatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tgtaggtctttatgttcctgggggaactgcagttttaccttcaacagctctgatgctatc 531
Query: 420 agttcctgcacagattgctgggtgtaagaccattgttattgcaactcctccaggtcagga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agttcctgcacagattgctgggtgtaagaccattgttattgcaactcctccaggtcagga 591
Query: 480 tggaagcatatgcaaggaggtactgtactgtgccaagaaggctggtgttactcacatcct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tggaagcatatgcaaggaggtactgtactgtgccaagaaggctggtgttactcacatcct 651
Query: 540 taaagctggtggagctcagg 559
||||||||||||||||||||
Sbjct: 652 taaagctggtggagctcagg 671