Jatropha Genome Database
- JcCB0131141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0131141.10 + phase: 0 /pseudo
(607 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04439 811 0.0
KJC_s17209 482 e-136
>KJC_c04439
Length = 501
Score = 811 bits (409), Expect = 0.0
Identities = 416/417 (99%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 1 atggctcctcacggcgagggatcagacgctgcaggggataccacagttgttcaagctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggctcctcacggcgagggatcagacgctgcaggggataccacagttgttcaagctgaa 120
Query: 61 caacgccctatttccaatatccttctcatcatcgcaatgcaaacggaagcaatgcctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacgccctatttccaatatccttctcatcatcgcaatgcaaacggaagcaatgcctgtg 180
Query: 121 gtgaacaaattccagctggaagaggaccaacatgctgcgtttccaaaaggtgttccctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgaacaaattccagctggaagaggaccaacatgctgcgtttccaaaaggtgttccctgg 240
Query: 181 gtctggtatcatggtgtttacaatgatctcaatatcaatttagtatggcctggaaaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtctggtatcatggtgtttacaatgatctcaatatcaatttagtatggcctggaaaagac 300
Query: 241 ccaattctgggggtggatagcgtcggcacagtctctgcatcacttttgacatatgctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaattctgggggtggatagcgtcggcacagtctctgcatcacttttgacatatgctgct 360
Query: 301 atccaagcattacagccagacttaatcatcaatgcaggcactgctggtggctttaaagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atccaagcattacagccagacttaatcatcaatgcaggcactgctggtggctttaaagca 420
Query: 361 aaaggagcgtccattggtgatgtttacctagcaagtgatgttgctttccatgacaga 417
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 aaaggagcgtccattggtgatgtttacctagcaagtgatgttgcttt-catgacaga 476
Score = 81.8 bits (41), Expect = 2e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 56 ctgaacaacgccctatttccaatatccttctcatcatcgca 96
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaacaacgccctatttccaatatccttctcatcatcgca 41
>KJC_s17209
Length = 305
Score = 482 bits (243), Expect = e-136
Identities = 264/267 (98%), Gaps = 3/267 (1%)
Strand = Plus / Plus
Query: 1 atggctcctcacggcgagggatcagacgctgcaggggataccacagttgttcaagctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atggctcctcacggcgagggatcagacgctgcaggggataccacagttgttcaagctgaa 98
Query: 61 caacgccctatttccaatatccttctcatcatcgcaatgcaaacggaagcaatgcctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 caacgccctatttccaatatccttctcatcatcgcaatgcaaacggaagcaatgcctgtg 158
Query: 121 gtgaacaaattccag-ctggaagaggaccaacatgctgcgtttcc-aaaaggtgttccct 178
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 159 gtgaacaaattccagcctggaagaggaccaacatgctgcgtttccaaaaaggtgttccct 218
Query: 179 -gggtctggtatcatggtgtttacaatgatctcaatatcaatttagtatggcctggaaaa 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ggggtctggtatcatggtgtttacaatgatctcaatatcaatttagtatggcctggaaaa 278
Query: 238 gacccaattctgggggtggatagcgtc 264
|||||||||||||||||||||||||||
Sbjct: 279 gacccaattctgggggtggatagcgtc 305