Jatropha Genome Database
- JcCB0129341.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0129341.10 - phase: 0
(2184 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07641 1051 0.0
KJC_c03604 60 2e-08
>KJC_c07641
Length = 633
Score = 1051 bits (530), Expect = 0.0
Identities = 537/538 (99%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 1274 cctcattgaacattgccaagaatcaaagccaaggattctttcctccacaaacgtacctaa 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctcattgaacattgccaagaatcaaagccaaggattctttcctccacaaacgtacctaa 60
Query: 1334 atggtgcaactgcccaggcagattatttggatacgtcttcttctacaacttcagtttgtg 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggtgcaactgcccaggcagattatttggatacgtcttcttctacaacttcagtttgtg 120
Query: 1394 tttctcagaatgatgtccatttgcagcagaacaactcatcttcatacaatccacaatcaa 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttctcagaatgatgtccatttgcagcagaacaactcatcttcatacaatccacaatcaa 180
Query: 1454 tgttgttgagagacacaagccaagatggggagctccaggcagatattaggaatagtgttc 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttgttgagagacacaagccaagatggggagctccaggcagatattaggaatagtgttc 240
Query: 1514 catatggtactaatgttgaaagccagttgggcgtacctatgaactctgataatgtgttgt 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catatggtactaatgttgaaagccagttgggcgtacctatgaactctgataatgtgttgt 300
Query: 1574 cagaaggcgttataggtttgggaaaagacttaccaaacaatctctcgtcaggttgtatgc 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagaaggcgttataggtttgggaaaagacttaccaaacaatctctcgtcaggttgtatgc 360
Query: 1634 ttgctaactgtgaaaactcaaaagatgctccatcttcaatggtttcccagtcatttggag 1693
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgctaactgtgaaaactc-aaagatgctccatcttcaatggtttcccagtcatttggag 419
Query: 1694 ttccagatatggcattcaattcaatcgactccacaatcaatgatagcagcttcttgaaca 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttccagatatggcattcaattcaatcgactccacaatcaatgatagcagcttcttgaaca 479
Query: 1754 gaggtccttgggcccctccaccacagtttcagcgaatgcgaacatatacaaaggttta 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaggtccttgggcccctccaccacagtttcagcgaatgcgaacatatacaaaggttta 537
Score = 200 bits (101), Expect = 1e-50
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1858 gtttacaaacgcggagctgtgggaaggtcaattgatataacccggtattcagattatgat 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gtttacaaacgcggagctgtgggaaggtcaattgatataacccggtattcagattatgat 592
Query: 1918 gagcttaagcaagacctggctcggaggtttggtatagaggg 1958
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gagcttaagcaagacctggctcggaggtttggtatagaggg 633
>KJC_c03604
Length = 1297
Score = 60.0 bits (30), Expect = 2e-08
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 1987 tggaagcttgtctatgtggatcatgaaaatgatgtcctgttagttggggatgatccatgg 2046
|||||||| || |||||||| |||| |||||||| || || |||| ||||||||||||
Sbjct: 255 tggaagctggtgtatgtggactatgagaatgatgttctattgattggagatgatccatgg 196
Query: 2047 gaagagtttgtgaactgtgtccgctgcattaagatcct 2084
|| |||||||| |||||||||||||| | ||||||
Sbjct: 195 gaggagtttgttggttgtgtccgctgcataaggatcct 158