Jatropha Genome Database

JcCB0128761.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0128761.10 - phase: 0 
         (564 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04264                                                            335   7e-92

>KJC_c04264 
          Length = 642

 Score =  335 bits (169), Expect = 7e-92
 Identities = 172/173 (99%)
 Strand = Plus / Minus

                                                                       
Query: 286 cgggataaagagttgcgtcgcattcctgtgatcatgatgtcggcacaggacgaggtctca 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 cgggataaagagttgcgtcgcattcctgtgatcatgatgtcggcacaggacgaggtctca 583

                                                                       
Query: 346 attgtcgttaagtgcttgaggttaggagcagcagactatcttgtaaagcctttacgcact 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 attgtcgttaagtgcttgaggttaggagcagcagactatcttgtaaagcctttacgcact 523

                                                                
Query: 406 aatgagctattgaacctgtggacacacatgtggagaaggaggcgcatggttgg 458
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 522 aatgagctattgaacctgtggacacacatgtggagaaggaggcgcatgcttgg 470