Jatropha Genome Database

JcCB0128551.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0128551.10 + phase: 0 /pseudo/partial
         (773 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00930                                                             76   1e-13

>KJC_c00930 
          Length = 1980

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                        
Query: 141  ttgcattagtgagataatgagaataacagcacccaatgcgccttatggtgatgagcaaat 200
            |||||||||||| ||||  |||||||| |||||  |||||||||||| ||||||||| ||
Sbjct: 1950 ttgcattagtgaaataaccagaataactgcaccagatgcgccttatgatgatgagcagat 1891

                                  
Query: 201  gaaggaagtatttcatctgatt 222
            |||||| || ||||| ||||||
Sbjct: 1890 gaaggatgtttttcagctgatt 1869