Jatropha Genome Database

JcCB0125821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0125821.10 + phase: 2 /partial
         (415 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07752                                                            617   e-177

>KJC_c07752 
          Length = 432

 Score =  617 bits (311), Expect = e-177
 Identities = 311/311 (100%)
 Strand = Plus / Minus

                                                                       
Query: 105 tgtgccttggtctgtttgcctcaataatagcaccttttggaggcttttttgcaagtggtt 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtgccttggtctgtttgcctcaataatagcaccttttggaggcttttttgcaagtggtt 362

                                                                       
Query: 165 ttaaaagagcttttaaagtcaaggattttggtgacagtattcctggccatggtggaatta 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttaaaagagcttttaaagtcaaggattttggtgacagtattcctggccatggtggaatta 302

                                                                       
Query: 225 cagatagaatggattgtcagatggtgatggctgtgtttgcatacatctatcatcaatcat 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagatagaatggattgtcagatggtgatggctgtgtttgcatacatctatcatcaatcat 242

                                                                       
Query: 285 tcgtcgtgcctcaaagtatctcagttgagatgatactagatcagatcttgacgaacctta 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgtcgtgcctcaaagtatctcagttgagatgatactagatcagatcttgacgaacctta 182

                                                                       
Query: 345 cttttgaggagcagcatgctttgtacacaaagcttggtgaaatcattcaggaaaggctgg 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttttgaggagcagcatgctttgtacacaaagcttggtgaaatcattcaggaaaggctgg 122

                      
Query: 405 tcggacgttct 415
           |||||||||||
Sbjct: 121 tcggacgttct 111