Jatropha Genome Database
- JcCB0124931.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0124931.10 + phase: 0 /pseudo/partial
(933 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08516 870 0.0
KJC_c06652 135 2e-31
>KJC_c08516
Length = 487
Score = 870 bits (439), Expect = 0.0
Identities = 480/488 (98%), Gaps = 8/488 (1%)
Strand = Plus / Plus
Query: 57 ccgatgctttc-cgcactcatggacagc----ttcacccacaactttgggaaaggaaatg 111
||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ccgatgctttctcgcactcatggacagccagcttcacccacaactttgggaaaggaaatg 60
Query: 112 gcagtttttgctgtcaggttaagtgaacaaaggcaggaaatttctcaagttaagataaag 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagtttttgctgtcaggttaagtgaacaaaggcaggaaatttctcaagttaagataaag 120
Query: 172 ggaaagtttgctggtgctgttggaaattataatgcacatattgttgcatatccaaatgtc 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaaagtttgctggtgctgttggaaattataatgcacatattgttgcatatccaaatgtc 180
Query: 232 aattggcctctaattgctaaagagtttgtggaatctcttggattgtatttcaatccctat 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattggcctctaattgctaaagagtttgtggaatctcttggattgtatttcaatccctat 240
Query: 292 gttactcagattgaaccacatgactatatggcaagactttttcaagcaattattgtattt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttactcagattgaaccacatgactatatggcaagactttttcaagcaattattgtattt 300
Query: 352 aacaatatattgattgattttgatagagatatatggggctacatatccttagcatacttt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacaatatattgattgattttgatagagatatatggggctacatatccttagcatacttt 360
Query: 412 aagcagataactaaagctggtgagattgggtcgtcaactatgcctcacaaagtaaatcct 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagcagataactaaagctggtgagattgggtcgtcaactatgcctcacaaagtaaatcct 420
Query: 472 attgattttgaaaatagcgaaggtaatctt-ggtaaagccaa-tggagggttatctcatc 529
|||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||
Sbjct: 421 attgattttgaaaatagcgaaggtaatcttaggtaaagccaagtgga-ggttatctcatc 479
Query: 530 tcagtgag 537
||||||||
Sbjct: 480 tcagtgag 487
>KJC_c06652
Length = 509
Score = 135 bits (68), Expect = 2e-31
Identities = 82/84 (97%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1 aatggatgaattgatcaaagcaatatgcaaaatggcccgaagataatgcttccattccga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 427 aatggatgaattgatcaaagcaatatgcaaaatgg-ccgaagataatgcttccattccga 485
Query: 61 tgctttc-cgcactcatggacagc 83
||||||| ||||||||||||||||
Sbjct: 486 tgctttctcgcactcatggacagc 509