Jatropha Genome Database
- JcCB0121351.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0121351.10 + phase: 0 /pseudo/partial
(1221 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02224 151 5e-36
KJC_s07866 101 4e-21
KJC_c08146 88 6e-17
KJC_s14123 82 4e-15
KJC_s14280 68 5e-11
KJC_c06232 60 1e-08
>KJC_c02224
Length = 1711
Score = 151 bits (76), Expect = 5e-36
Identities = 133/152 (87%)
Strand = Plus / Plus
Query: 637 atggctcctgaatatgcaatgcgtggctacttaaccaacaaagcagatgtttatagcttt 696
|||||||| |||||||||||| | || ||||| || | |||||||||||||| ||||||
Sbjct: 1071 atggctccagaatatgcaatgaggggttacttgacagataaagcagatgtttacagcttt 1130
Query: 697 ggagttgttgcattggaaattgtcagtggaaagagcaacacaaattacaggccaaaagaa 756
||||||||||| ||||||||||||||||| || |||||||| |||||||| ||||||||
Sbjct: 1131 ggagttgttgctttggaaattgtcagtgggaaaagcaacaccaattacagaccaaaagag 1190
Query: 757 gaatttgtttaccttcttgactgggcttatgt 788
|| |||||||| |||||||| ||||| |||||
Sbjct: 1191 gagtttgtttatcttcttgattgggcctatgt 1222
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 211 aagcagctctcctcaaagtctaagcaagggaaccgtgaatttgtaaatgagataggcatg 270
||||||||||| || || || || |||||||||||||||||||| |||||||||||||||
Sbjct: 648 aagcagctctcttccaaatcaaaacaagggaaccgtgaatttgtgaatgagataggcatg 707
Query: 271 atatctgcacttcaacatccaaatcttgtaaagctatatggatgttgtgttgaaggaaac 330
|||||||| | || ||||| |||||||| | ||| ||||| || || |||| ||||||
Sbjct: 708 atatctgccttgcagcatcctaatcttgtgaggctttatggctgctgcattgagggaaac 767
Query: 331 cagttgttgcttatatatgaatacatggaaaa 362
|| ||||| | | ||||||||| |||||||
Sbjct: 768 caactgttgttagtttatgaatacttggaaaa 799
>KJC_s07866
Length = 516
Score = 101 bits (51), Expect = 4e-21
Identities = 144/175 (82%)
Strand = Plus / Minus
Query: 545 taaatgccaaaatttcagattttggtctggcaaagctaaatgaagatgacaatacccaca 604
||||||| || ||||| ||||||||| |||| ||||| |||||||||| || |||||||
Sbjct: 322 taaatgctaagatttctgattttggtttggccaagcttgatgaagatgagaacacccaca 263
Query: 605 ttagcacccgagttgcgggaactattggctatatggctcctgaatatgcaatgcgtggct 664
| |||||| ||||||| |||||||| || || ||||| || ||||||||| | | || |
Sbjct: 262 tcagcaccagagttgctggaactatagggtacatggcaccggaatatgcattatggggtt 203
Query: 665 acttaaccaacaaagcagatgtttatagctttggagttgttgcattggaaattgt 719
||||||| | || ||||||||||| || ||||| |||||||| || ||||||||
Sbjct: 202 acttaactcataaggcagatgtttacagttttggggttgttgctttagaaattgt 148
>KJC_c08146
Length = 739
Score = 87.7 bits (44), Expect = 6e-17
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 584 atgaagatgacaatacccacattagcacccgagttgcgggaactattggctatatggctc 643
|||||||||| || | |||||| |||||||||||||| ||||| || || |||||||| |
Sbjct: 598 atgaagatgaaaagagccacatcagcacccgagttgctggaaccatagggtatatggcac 657
Query: 644 ctgaatatgcaatgcgtggctacttaaccaacaaagcagatgtttatagctttggagttg 703
| |||||||| | | || ||| | ||| |||||||||||||||| || | ||||||||
Sbjct: 658 cagaatatgcgctatggggttacctgaccgacaaagcagatgtttacagttatggagttg 717
Query: 704 ttgcattggaaattgt 719
| ||||||||||||||
Sbjct: 718 tggcattggaaattgt 733
Score = 60.0 bits (30), Expect = 1e-08
Identities = 141/178 (79%)
Strand = Plus / Plus
Query: 146 ttggagagggtggttttggttctgtttacaagggtcaactatctgatggaactataattg 205
||||||| |||||||||||| |||| ||||||||| | | |||||||||||| | || |
Sbjct: 168 ttggagaaggtggttttggtcctgtatacaagggtgtaatgtctgatggaactgttatag 227
Query: 206 ccgtgaagcagctctcctcaaagtctaagcaagggaaccgtgaatttgtaaatgagatag 265
| || || || ||||| || || || | |||||| || || ||||| | ||||||||||
Sbjct: 228 ctgtaaaacaactctcatctaaatcaaggcaaggaaatcgcgaattcttgaatgagatag 287
Query: 266 gcatgatatctgcacttcaacatccaaatcttgtaaagctatatggatgttgtgttga 323
| ||||| ||| | |||||| |||||||||| ||||| |||||| |||||||||
Sbjct: 288 gaatgatttcttgtttgcaacatgcaaatcttgtcaagctgcatggattttgtgttga 345
>KJC_s14123
Length = 498
Score = 81.8 bits (41), Expect = 4e-15
Identities = 108/129 (83%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 235 caagggaaccgtgaatttgtaaatgagataggcatga-tatctgcacttcaacatccaaa 293
|||||||||||||||||||| |||||||||||||||| ||||||| | || ||||| ||
Sbjct: 387 caagggaaccgtgaatttgtgaatgagataggcatgactatctgccttgcagcatcctaa 328
Query: 294 tcttgtaaagctatatggatgttgtgttgaaggaaaccagttgttgcttatatatgaata 353
|||||| | ||| ||||| || || ||||||||||||| ||||| | | ||||||||
Sbjct: 327 tcttgtgaggctttatggctgctgcattgaaggaaaccaactgttgttagtttatgaata 268
Query: 354 catggaaaa 362
| |||||||
Sbjct: 267 cttggaaaa 259
>KJC_s14280
Length = 492
Score = 67.9 bits (34), Expect = 5e-11
Identities = 127/158 (80%)
Strand = Plus / Minus
Query: 169 gtttacaagggtcaactatctgatggaactataattgccgtgaagcagctctcctcaaag 228
||||||||||| |||||| ||||| ||| ||||||| || ||||||||||| || |
Sbjct: 475 gtttacaagggaacactatcagatggtactctaattgctgttaagcagctctcttctaga 416
Query: 229 tctaagcaagggaaccgtgaatttgtaaatgagataggcatgatatctgcacttcaacat 288
|| ||||| || || || ||||| ||||||| ||||||||||| |||| | |||||
Sbjct: 415 tcaaagcagggaaatcgagaattcttaaatgaaataggcatgatttctgttttacaacac 356
Query: 289 ccaaatcttgtaaagctatatggatgttgtgttgaagg 326
|||||||||| | | | ||||||||||||||||||||
Sbjct: 355 ccaaatcttgccaggttgtatggatgttgtgttgaagg 318
>KJC_c06232
Length = 489
Score = 60.0 bits (30), Expect = 1e-08
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 553 aaaatttcagattttggtctggcaaagctaaatgaagatgacaatacccacattagcacc 612
|||||||||||||||||| |||| || || |||| ||| | || ||||| || ||||||
Sbjct: 316 aaaatttcagattttggtttggccaaactttatgatgataagaagacccatataagcacc 257
Query: 613 cgagttgcgggaactattggctatatggctcctgaatatgcaatgcgtgg 662
|| || || ||||| ||||| ||| | || ||||||||||| ||||||||
Sbjct: 256 cgtgtcgcaggaacaattgggtatcttgcacctgaatatgccatgcgtgg 207