Jatropha Genome Database

JcCB0120561.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0120561.20 + phase: 0 /partial
         (450 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10752                                                            835   0.0  

>KJC_c10752 
          Length = 517

 Score =  835 bits (421), Expect = 0.0
 Identities = 421/421 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggaggattatggaggaagtgacgatgagtactattactctgatgaccgagactcgctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggaggattatggaggaagtgacgatgagtactattactctgatgaccgagactcgctc 362

                                                                       
Query: 61  gacggtcttgagaatgaggaatccgatttccgctgggccccacccaagggtcccagtacg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacggtcttgagaatgaggaatccgatttccgctgggccccacccaagggtcccagtacg 302

                                                                       
Query: 121 aagataatcacgaaggcgtccctcttggcagcacagagggaagatctgcgcagagtaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagataatcacgaaggcgtccctcttggcagcacagagggaagatctgcgcagagtaatg 242

                                                                       
Query: 181 gagctgctatcattgagagaacatcacgcaaggaccttgttgatacattaccgttgggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagctgctatcattgagagaacatcacgcaaggaccttgttgatacattaccgttgggat 182

                                                                       
Query: 241 gttgagaggctgttggctgtgtttgtagagaaggggaaatcatacttattcactgaagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttgagaggctgttggctgtgtttgtagagaaggggaaatcatacttattcactgaagca 122

                                                                       
Query: 301 ggtgttactgttgttgagcaactagatattgattcaccactgacttcatcttctacgata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgttactgttgttgagcaactagatattgattcaccactgacttcatcttctacgata 62

                                                                       
Query: 361 acatgtgatatatgcatagaggacatatctggtgataaggcaaccagaatggactgtggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acatgtgatatatgcatagaggacatatctggtgataaggcaaccagaatggactgtggc 2

            
Query: 421 c 421
           |
Sbjct: 1   c 1