Jatropha Genome Database
- JcCB0118121.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0118121.20 - phase: 0
(2142 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04088 1187 0.0
KJC_c10131 773 0.0
KJC_c09805 143 2e-33
>KJC_c04088
Length = 617
Score = 1187 bits (599), Expect = 0.0
Identities = 605/607 (99%)
Strand = Plus / Plus
Query: 595 gcttcaggagatttagttccattatcttatattgctggattattaaccggccggcctaat 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttcaggagatttagttccattatcttatattgctggattattaaccggccggcctaat 60
Query: 655 tccaaagccattggccctaccggagaatctttagatgctgttgaagcttttcgccttgct 714
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccaaagccattggcccttccggagaatctttagatgctgttgaagcttttcgccttgct 120
Query: 715 ggtattgattctggattctttgagttacagcctaaagaaggtcttgctcttgttaatggc 774
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatattgattctggattctttgagttacagcctaaagaaggtcttgctcttgttaatggc 180
Query: 775 acagcagttggttctgggttggcttctatggttctatttgaagcaaatgttcttgctgtc 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagcagttggttctgggttggcttctatggttctatttgaagcaaatgttcttgctgtc 240
Query: 835 ttgtcagaaatattatcagcaattttcgccgaagttatgaatggaaaacctgaatttact 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtcagaaatattatcagcaattttcgccgaagttatgaatggaaaacctgaatttact 300
Query: 895 gatcatttgacacataaattgaagcatcatcctggtcaaattgaagctgcagctataatg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatcatttgacacataaattgaagcatcatcctggtcaaattgaagctgcagctataatg 360
Query: 955 gagcatattttagatggtagctcctacattaaagctgctaaacaattacatgaaattgat 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcatattttagatggtagctcctacattaaagctgctaaacaattacatgaaattgat 420
Query: 1015 ccattgcagaaaccaaaacaagatcgttatgctttaagaacttctcctcaatggttaggc 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccattgcagaaaccaaaacaagatcgttatgctttaagaacttctcctcaatggttaggc 480
Query: 1075 cctcaaatcgaagttattcgattttctactaaatcaattgaaagagagattaactctgtc 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctcaaatcgaagttattcgattttctactaaatcaattgaaagagagattaactctgtc 540
Query: 1135 aatgataatcctttgattgatgtttcaagaaacaaggctttacatggtggaaactttcaa 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatgataatcctttgattgatgtttcaagaaacaaggctttacatggtggaaactttcaa 600
Query: 1195 ggcacac 1201
|||||||
Sbjct: 601 ggcacac 607
>KJC_c10131
Length = 400
Score = 773 bits (390), Expect = 0.0
Identities = 399/401 (99%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 1168 aaggctttacatggtggaaactttcaaggcacaccaattggtgtttcaatggataatgca 1227
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 400 aaggctttacatggtggaaactttcaaggcacaccaattggngtttcaatggataatgca 341
Query: 1228 cgtttggctattgcttcaattgggaagttaatgtttgctcaatttagtgagctcgtaaat 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cgtttggctattgcttcaattgggaagttaatgtttgctcaatttagtgagctcgtaaat 281
Query: 1288 gatttttacaataatgggttgccttcaaatctttctggaggaagaaatccgagtttggat 1347
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 280 gatttttacaataatgggttgccttcaaatctttctggag-aagaaatccgagtttggat 222
Query: 1348 tatggattcaaaggagctgaaattgcaatggcttcatactgttctgagcttcaatttctt 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tatggattcaaaggagctgaaattgcaatggcttcatactgttctgagcttcaatttctt 162
Query: 1408 gctaatccagttactagccatgtgcaaagtgcagagcagcataatcaagatgtgaactca 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gctaatccagttactagccatgtgcaaagtgcagagcagcataatcaagatgtgaactca 102
Query: 1468 ttagggttaatttcttcaagaaagactcaagaagcgattgatattttgaagcttatgtct 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ttagggttaatttcttcaagaaagactcaagaagcgattgatattttgaagcttatgtct 42
Query: 1528 tcaactttcttagtagcactatgtcaagctattgacttgag 1568
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tcaactttcttagtagcactatgtcaagctattgacttgag 1
>KJC_c09805
Length = 562
Score = 143 bits (72), Expect = 2e-33
Identities = 265/328 (80%), Gaps = 1/328 (0%)
Strand = Plus / Plus
Query: 709 cttgctggtattgattctggattctttgagttacagcctaaagaaggtcttgctcttgtt 768
|||||||| || ||| |||||| ||||| || || |||||||||||||| ||| | ||
Sbjct: 236 cttgctggaatagatagtggattttttgaattgcaacctaaagaaggtctagctttagta 295
Query: 769 aatggcacagcagttggttctgggttggcttctatggttctatttgaagcaaatgttctt 828
||||| || || |||||||| || || || || ||||| || |||||||| ||||| |
Sbjct: 296 aatgggactgcggttggttcaggtttagcatcaatggtactctttgaagctaatgtgttg 355
Query: 829 gctgtcttgtcagaaatattatcagcaattttcgccgaagttatgaatggaaaacctgaa 888
|| | || ||||| || | |||| |||||| || ||||||||| | |||||||||||
Sbjct: 356 gcaattttagcagaagtactctcaggaatttttgctgaagttatgcaaggaaaacctgag 415
Query: 889 tttactgatcatttgacacataaattgaagcatcatcctggtcaaattgaagctgcagct 948
|| || |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 416 tt-acagatcatttgacacataaattgaagcatcatccaggtcaaattgaagcagcagca 474
Query: 949 ataatggagcatattttagatggtagctcctacattaaagctgctaaacaattacatgaa 1008
|||||||| ||||| || ||||| ||| | || | ||||| || || | |||||||||
Sbjct: 475 ataatggaacatatattggatggcagcgcatatgtgaaagccgcaaagaagttacatgaa 534
Query: 1009 attgatccattgcagaaaccaaaacaag 1036
||||||||||||| || || |||||||
Sbjct: 535 cttgatccattgcaaaagcctaaacaag 562
Score = 67.9 bits (34), Expect = 1e-10
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 418 aatggaacagaaacatgtcacacattacctcactctgcaacaagagcagcaatgctagtg 477
|||||||| ||||| || || | ||| ||||| || |||||||||||||||||| |||||
Sbjct: 4 aatggaaccgaaacttgccatatattgcctcattcagcaacaagagcagcaatgttagtg 63
Query: 478 agaataaatactcttcttcaaggttactcaggcattagatttgaaatctt 527
||||| || || | || |||||||| || ||||| |||||||| |||||
Sbjct: 64 agaatcaacacattactgcaaggttattctggcataagatttgagatctt 113