Jatropha Genome Database

JcCB0117661.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0117661.20 - phase: 1 /pseudo/partial
         (854 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10581                                                            547   e-155

>KJC_c10581 
          Length = 468

 Score =  547 bits (276), Expect = e-155
 Identities = 276/276 (100%)
 Strand = Plus / Plus

                                                                       
Query: 90  gttatacagatgaatattgaagagaatgcaaggaaagctattgccaaggaactaaaaatc 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gttatacagatgaatattgaagagaatgcaaggaaagctattgccaaggaactaaaaatc 252

                                                                       
Query: 150 aatcaatcatcacaatgtccgtatgttgtcatgtgctaccaatctttctatgacaatggt 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aatcaatcatcacaatgtccgtatgttgtcatgtgctaccaatctttctatgacaatggt 312

                                                                       
Query: 210 gccatttcaattatcttagagtatatggatggtggatctttggcagatcttctgaaaaaa 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gccatttcaattatcttagagtatatggatggtggatctttggcagatcttctgaaaaaa 372

                                                                       
Query: 270 gtaaagacaattcctgaagcacatctcgctgccatttgtaagcaggtactgaagggttta 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtaaagacaattcctgaagcacatctcgctgccatttgtaagcaggtactgaagggttta 432

                                               
Query: 330 ttgtatcttcatcatgaaaaacacattatccacagg 365
           ||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttgtatcttcatcatgaaaaacacattatccacagg 468