Jatropha Genome Database
- JcCB0116941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0116941.10 + phase: 0
(447 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00222 228 9e-60
KJC_c00839 159 7e-39
KJC_c08090 82 1e-15
KJC_c00274 68 2e-11
>KJC_c00222
Length = 936
Score = 228 bits (115), Expect = 9e-60
Identities = 298/359 (83%)
Strand = Plus / Plus
Query: 31 aaggacttgcagagagatcctccaacttcatgcagtgcaggtcctgtagctgaggatatg 90
||||| ||||||| |||||| || ||||| ||||||||||||||||||||||| || |||
Sbjct: 231 aaggatttgcagaaagatccacctacttcttgcagtgcaggtcctgtagctgaagacatg 290
Query: 91 ttccactggcaagctaccatcatcggtccgaatgacagtccatatgctggtggtgttttc 150
|||||||||||||| |||||||| || || | ||| ||||||||||| || ||||| ||
Sbjct: 291 ttccactggcaagcaaccatcatgggaccaactgatagtccatatgcaggaggtgtattt 350
Query: 151 cttgtcactattcatttcccacctgactatcctttcaagcctcccaaggtcgccttcagg 210
|| |||||||| ||||| || || || ||||||||||||||||| ||||| || || |||
Sbjct: 351 ctagtcactatccattttcctccagattatcctttcaagcctccgaaggttgcatttagg 410
Query: 211 actaaggttttccatccaaacatcaatagcaatggaaatatatgtttggacatactcaaa 270
|| ||||| || ||||||||||| || || ||||||| || ||| | || || ||||||
Sbjct: 411 accaaggtgtttcatccaaacataaacagtaatggaagcatttgtcttgatatcctcaaa 470
Query: 271 gaacaatggagtcctgcactcaccatatccaaggttttgctgtccatatgctctttgctt 330
||||||||||| ||||| |||||||| || ||||| ||||| || || ||||| |||||
Sbjct: 471 gaacaatggagccctgctctcaccatttctaaggtattgctatctatttgctcattgctg 530
Query: 331 acagacccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaagactga 389
|| || |||||||| ||||| ||||| || || || ||||| ||||||| ||||||||
Sbjct: 531 actgatccaaatcccgatgacccacttgtcccagagattgcccatatgtataagactga 589
>KJC_c00839
Length = 808
Score = 159 bits (80), Expect = 7e-39
Identities = 251/308 (81%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || |||||||| || ||||| || ||||| || ||||| || |||||||||
Sbjct: 104 gatcctcccacatcatgcagcgctggtcccgttgctgaagacatgtttcattggcaagct 163
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| ||||| ||||| ||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 164 acgatcatgggtccccctgacagtccatatgcagggggtgttttccttgttactattcat 223
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
||||| || || ||||| || |||||||||||||| || ||||| || ||||| |||||
Sbjct: 224 ttccctccggattatccatttaagcctcccaaggtggctttcagaacaaaggtattccac 283
Query: 226 ccaaacatcaatagcaatggaaatatatgtttggacatactcaaagaacaatggagtcct 285
||||| || || ||||| || | || ||| | |||||| | || || |||||||| |||
Sbjct: 284 ccaaatattaacagcaacgggagcatttgtcttgacatattgaaggagcaatggagccct 343
Query: 286 gcactcaccatatccaaggttttgctgtccatatgctctttgcttacagacccaaatcct 345
|| || |||||||| ||||| ||||| || || || |||||| | || || || ||||||
Sbjct: 344 gctctaaccatatctaaggtgttgctttcaatttgttctttgttgacggatcccaatcct 403
Query: 346 gatgatcc 353
||||||||
Sbjct: 404 gatgatcc 411
>KJC_c08090
Length = 452
Score = 81.8 bits (41), Expect = 1e-15
Identities = 149/185 (80%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || || ||||| || ||||| ||||||||||| ||||| |||||||||||
Sbjct: 29 gatcctcctacctcttgcagcgctggtccggtagctgaggacatgtttcactggcaagca 88
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| || || ||||| ||||||||| || |||| || || || || || |||||||||
Sbjct: 89 acaataatgggtcctcctgacagtccttacactggaggcgtgtttctagttactattcat 148
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
|| || ||||| ||||| || ||||| || ||||| || |||||||| |||||||| ||
Sbjct: 149 tttcctcctgattatccatttaagccacctaaggttgcattcaggacaaaggtttttcac 208
Query: 226 ccaaa 230
|||||
Sbjct: 209 ccaaa 213
>KJC_c00274
Length = 787
Score = 67.9 bits (34), Expect = 2e-11
Identities = 307/398 (77%)
Strand = Plus / Minus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || || ||||| ||||| ||||| || || || |||||||| ||||||||
Sbjct: 631 gatcctcctacctcttgcagcgcaggccctgttgcggaagacatgttccattggcaagca 572
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| || || ||||| ||| ||||||||||| ||||| || || || || || ||||||
Sbjct: 571 acaattatgggtcctcctgatagtccatatgcaggtggagtgtttctagtgacgattcat 512
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
|| || || |||||||| || || || || ||||| || |||||||| ||||| || ||
Sbjct: 511 tttcctccagactatccatttaaaccaccgaaggttgcattcaggacaaaggtctttcac 452
Query: 226 ccaaacatcaatagcaatggaaatatatgtttggacatactcaaagaacaatggagtcct 285
|| || ||||| |||||||| | || || | || || | || || || ||||| |||
Sbjct: 451 cccaatatcaacagcaatggtagcatttgccttgatattttgaaggagcagtggagccct 392
Query: 286 gcactcaccatatccaaggttttgctgtccatatgctctttgcttacagacccaaatcct 345
|| || ||||| |||||||| ||||| || || || ||| | | || ||||||||||||
Sbjct: 391 gcccttaccatttccaaggtgttgctttcaatttgttctctattgacggacccaaatcct 332
Query: 346 gatgatccactggttcctgaaattgctcatatgtgcaagactgacaaagtcaagtacgat 405
|| ||||| |||| || |||||||| || |||| |||||||| | ||| |||||
Sbjct: 331 gacgatccgttggtgccagaaattgcccacatgtataagactgataggagcaaatacgag 272
Query: 406 tctactgctaggagctggacccaaaagtatgctatggg 443
| || || |||||||||||||| ||||||||||||||
Sbjct: 271 gcaacagcaaggagctggacccagaagtatgctatggg 234