Jatropha Genome Database
- JcCB0113601.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0113601.10 + phase: 0
(810 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05709 1223 0.0
>KJC_c05709
Length = 732
Score = 1223 bits (617), Expect = 0.0
Identities = 631/633 (99%), Gaps = 2/633 (0%)
Strand = Plus / Minus
Query: 1 atggctattccatgtcagccattgattggatcagaaaagttatcaatggaggcaggacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atggctattccatgtcagccattgattggatcagaaaagttatcaatggaggcaggacct 573
Query: 61 ttatctcctatggctcctatatcccaacctccagttattcttacgcaggacgagctt-aa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 572 ttatctcctatggctcctatatcccaacctccagttattcttacgcaggacgagctttaa 513
Query: 120 aaagattgcagcttataaagctgtcgactttgtccagtctggtatggttctcggcctcgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aaagattgcagcttataaagctgtcgactttgtccagtctggtatggttctcggcctcgg 453
Query: 180 taccggctccaccgccaaacacgccgtcgaccgaatcgcggatctcttgcaccaaggaaa 239
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taccggctccaccgc-aaacacgccgtcgaccgaatcgcggatctcttgcaccaaggaaa 394
Query: 240 gttaaagaacattattggaatacccacttcaaaaaagactcaccaacaagctttatctct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gttaaagaacattattggaatacccacttcaaaaaagactcaccaacaagctttatctct 334
Query: 300 aggtattcctttatctgatcttgattctcaccccaacgtcgatcttgccatcgacggcgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aggtattcctttatctgatcttgattctcaccccaacgtcgatcttgccatcgacggcgc 274
Query: 360 cgatgaggtggattccgatctcaatttggtgaaaggacgaggtgggtctttgttaagaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cgatgaggtggattccgatctcaatttggtgaaaggacgaggtgggtctttgttaagaga 214
Query: 420 gaaaatgattgaaagtgcttgtaaaaagtttgtagttattgttgatgagtcaaaattggt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaaaatgattgaaagtgcttgtaaaaagtttgtagttattgttgatgagtcaaaattggt 154
Query: 480 tcctcatattggagctaatggagctatgcctgtagaggttgtgcctttctgttggaaatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tcctcatattggagctaatggagctatgcctgtagaggttgtgcctttctgttggaaatt 94
Query: 540 tacacaagaaaggcttcaagagatgtttggttatgcagattgcttggccaagttgagaag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tacacaagaaaggcttcaagagatgtttggttatgcagattgcttggccaagttgagaag 34
Query: 600 aaatggagacagtgaaagtggtgagccttttgt 632
|||||||||||||||||||||||||||||||||
Sbjct: 33 aaatggagacagtgaaagtggtgagccttttgt 1