Jatropha Genome Database

JcCB0113371.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0113371.20 - phase: 0 /partial
         (591 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09325                                                            712   0.0  

>KJC_c09325 
          Length = 372

 Score =  712 bits (359), Expect = 0.0
 Identities = 369/371 (99%), Gaps = 1/371 (0%)
 Strand = Plus / Plus

                                                                       
Query: 98  ctgaatatcatcacaaaaataaccgggtatattgctggaaaggtctacgtttttcagcta 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctgaatatcatcacaaaaataaccgggtatattgctggaaaggtctacgtttttcagcta 60

                                                                       
Query: 158 ggcaggacttggatggattttctagatttactgaccatggcatcgaaggagttgttcctc 217
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61  ggcaggacttggatggattttctagatttactgaccatggcatcgaaggggttgttcctc 120

                                                                       
Query: 218 tagaacttctgccccctgatgtccgatccaaatatcaggccaaacctaatgataggtcca 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagaacttctgccccctgatgtccgatccaaatatcaggccaaacctaatgataggtcca 180

                                                                       
Query: 278 aacgtgccaaaaaggaggaggtgaagggtgcatcaaatcaagcagaagataatcagatta 337
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacgtgcc-aaaaggaggaggtgaagggtgcatcaaatcaagcagaagataatcagatta 239

                                                                       
Query: 338 cgacacctgcaagtgtgcttgatggtgaaggaatcagaactgatgaagcctcagctactc 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cgacacctgcaagtgtgcttgatggtgaaggaatcagaactgatgaagcctcagctactc 299

                                                                       
Query: 398 caatggacactgatgctatggctacaacagccagcacccctcaaggcggcactccaacgc 457
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 caatggacactgatgctatggctacaacagccagcacccctcaaggcggcactccaacgc 359

                      
Query: 458 cagaagaacat 468
           |||||||||||
Sbjct: 360 cagaagaacat 370