Jatropha Genome Database

JcCB0112721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0112721.10 - phase: 0 /pseudo
         (987 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c11309                                                            109   1e-23

>KJC_c11309 
          Length = 632

 Score =  109 bits (55), Expect = 1e-23
 Identities = 62/63 (98%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 836 tgtattcaaagga-tggatctgtcaaggaggttccaaaagttatgcagcttaaaggacac 894
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgtattcaaaggaatggatctgtcaaggaggttccaaaagttatgcagcttaaaggacac 573

              
Query: 895 aag 897
           |||
Sbjct: 572 aag 570