Jatropha Genome Database

JcCB0111501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0111501.10 + phase: 0 /partial
         (660 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06431                                                             66   1e-10

>KJC_c06431 
          Length = 432

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 59  caactcgtgtcatgggaacttttgggtacttggctcctgagtatgcatctagtggcaagc 118
           |||| ||||| |||||||| ||||||||  ||||||||||||| ||| | ||||||||| 
Sbjct: 319 caacacgtgtgatgggaacctttgggtatatggctcctgagtacgcaacaagtggcaagt 260

                                
Query: 119 ttactgagaaatctgacgttt 139
           | ||||| |||||||| ||||
Sbjct: 259 tgactgaaaaatctgatgttt 239