Jatropha Genome Database
- JcCB0111071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0111071.10 + phase: 0 /partial
(918 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02488 944 0.0
KJC_c04944 527 e-149
KJC_s18706 103 7e-22
>KJC_c02488
Length = 918
Score = 944 bits (476), Expect = 0.0
Identities = 476/476 (100%)
Strand = Plus / Minus
Query: 43 gatgccaggaattttggatgggaaataaatgaaaacgtgaacttcaactggaaaaaactt 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gatgccaggaattttggatgggaaataaatgaaaacgtgaacttcaactggaaaaaactt 417
Query: 103 ttgcacaagaagactgatgaaataatgaggttaaatggaatttacaagcggttactatct 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttgcacaagaagactgatgaaataatgaggttaaatggaatttacaagcggttactatct 357
Query: 163 aatgcgggagttaaactatttgaaggagggggaaaggttgttggtccaaatgaagttgag 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aatgcgggagttaaactatttgaaggagggggaaaggttgttggtccaaatgaagttgag 297
Query: 223 gtgacacaactagatggtactaaattgagctactcagcaaagcacatattgattgcaact 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtgacacaactagatggtactaaattgagctactcagcaaagcacatattgattgcaact 237
Query: 283 ggaagtagagctcaacgtcctaatattcctggccaggagctggctataacctctgatgag 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ggaagtagagctcaacgtcctaatattcctggccaggagctggctataacctctgatgag 177
Query: 343 gcattgagtctagaagagatgcccaagcgtgctgttgttcttggtggagggtacattgct 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gcattgagtctagaagagatgcccaagcgtgctgttgttcttggtggagggtacattgct 117
Query: 403 gttgagtttgcttcaatatggcgcggcatgggtgctactgtggacttagttttcagaaag 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gttgagtttgcttcaatatggcgcggcatgggtgctactgtggacttagttttcagaaag 57
Query: 463 gaacttccgttaagaggttttgatgatgagatgagagcagtggttgcaagaaatct 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 gaacttccgttaagaggttttgatgatgagatgagagcagtggttgcaagaaatct 1
>KJC_c04944
Length = 711
Score = 527 bits (266), Expect = e-149
Identities = 299/305 (98%), Gaps = 5/305 (1%)
Strand = Plus / Minus
Query: 614 aattattggcagatgttgtactctttgctactggtcgggcacccaactcaaagaggttaa 673
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 711 aattattggcagatgttgtactctttgctactggtcgggcacccaactcaa-gaggttaa 653
Query: 674 atttggaagctgttggcgtggagcttgatagtgcgggagctattaaggttgatgagtact 733
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 652 atttggaagctgttggcgtggagcttgatagtgcgggagc-attaaggttgatgagtact 594
Query: 734 catgcaccaatgtacctagcatatatgctattggtgatgtcacaaaccgaatgaatctta 793
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 593 catgcaccaatgtacctagcatatatgctattggtgatgtcacaacc--aatgaatctta 536
Query: 794 cccctgtggccttaatggaaggaacatgctttgcaaaaactgtttttggtgggcaaccta 853
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ccc-tgtggccttaatggaaggaacatgctttgcaaaaactgtttttggtgggcaaccta 477
Query: 854 gcaaaccagactataaggatataccatgcgccgtttttagtataccacctctttctgtgg 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gcaaaccagactataaggatataccatgcgccgtttttagtataccacctctttctgtgg 417
Query: 914 taggc 918
|||||
Sbjct: 416 taggc 412
>KJC_s18706
Length = 426
Score = 103 bits (52), Expect = 7e-22
Identities = 59/60 (98%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 495 gagagcagtggttgcaagaaatctggaaggcaggggaataaatttgcaccctaggacgac 554
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 368 gagagcagtggttgcaagaaatctggaaggcagggg-ataaatttgcaccctaggacgac 426