Jatropha Genome Database

JcCB0107371.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0107371.10 + phase: 0 /partial
         (348 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04491                                                            652   0.0  

>KJC_c04491 
          Length = 633

 Score =  652 bits (329), Expect = 0.0
 Identities = 329/329 (100%)
 Strand = Plus / Minus

                                                                       
Query: 20  ccaacggggagttgtcttgtcaaatgtatcagcgatctgctgacatgggtctgggtgtgc 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccaacggggagttgtcttgtcaaatgtatcagcgatctgctgacatgggtctgggtgtgc 440

                                                                       
Query: 80  cattcaacattgcatcttatgcgctcttgacatgcattgtgtctcatgtttgtgatcttg 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cattcaacattgcatcttatgcgctcttgacatgcattgtgtctcatgtttgtgatcttg 380

                                                                       
Query: 140 ttcctggtgattttgttcatgtgcttggcgatgctcatgtttatcggactcatgtcaggc 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttcctggtgattttgttcatgtgcttggcgatgctcatgtttatcggactcatgtcaggc 320

                                                                       
Query: 200 ctctccaggagcagcttcagaaaccgccaaagccttttccaattttgaagattaatccgg 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctctccaggagcagcttcagaaaccgccaaagccttttccaattttgaagattaatccgg 260

                                                                       
Query: 260 agaagaaaaacatagattcttttgtagcagctgatttcaaactcataggttatgatcctc 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agaagaaaaacatagattcttttgtagcagctgatttcaaactcataggttatgatcctc 200

                                        
Query: 320 atcaaaaaattgaaatgaaaatggcaata 348
           |||||||||||||||||||||||||||||
Sbjct: 199 atcaaaaaattgaaatgaaaatggcaata 171