Jatropha Genome Database

JcCB0104641.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0104641.10 - phase: 1 /partial
         (338 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04861                                                            630   0.0  

>KJC_c04861 
          Length = 574

 Score =  630 bits (318), Expect = 0.0
 Identities = 318/318 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaaggaaaaaatttgaaattggtggatgctcctgtttctggtggtgtcaagagggcctcg 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gaaggaaaaaatttgaaattggtggatgctcctgtttctggtggtgtcaagagggcctcg 177

                                                                       
Query: 63  gatggaacacttacgataatggcttctggtgatgacgaagctcttatacatactggtgca 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gatggaacacttacgataatggcttctggtgatgacgaagctcttatacatactggtgca 237

                                                                       
Query: 123 gtgcttgcagcattaagcgagaagctatatgtcatcaagggaggttgtggagctggaagt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gtgcttgcagcattaagcgagaagctatatgtcatcaagggaggttgtggagctggaagt 297

                                                                       
Query: 183 ggtgtgaagatggttaatcagttacttgctggagttcatatagcttcagcagctgaggca 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggtgtgaagatggttaatcagttacttgctggagttcatatagcttcagcagctgaggca 357

                                                                       
Query: 243 atggcatttggagctcgattaggtctcaatacaaggatcttgtttgatttcatagtgaac 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atggcatttggagctcgattaggtctcaatacaaggatcttgtttgatttcatagtgaac 417

                             
Query: 303 agtgaaggaacatcctgg 320
           ||||||||||||||||||
Sbjct: 418 agtgaaggaacatcctgg 435